Transcript Information: S_Transcript_6982.p1


Annotated TAIR IDAT4G19170.1
Annotated Gene Namenine-cis-epoxycarotenoid dioxygenase 4
Annotated Gene Symbol(s)NCED4, CCD4
Annotation TypeOrtholog
Chromosome Positionchr4:10481835-10483622 | Forward length=595
E-Value1.8E-64
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.34339356432491
Replicate 20.14234057779042
Replicate 30
Condition 2: 8 Hour
Replicate 10.27516632667268
Replicate 21.4433450735308
Replicate 30.68760798725746
Condition 3: 24 Hour
Replicate 10.28186946439476
Replicate 20.43865441760672
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_6982.p1 GENE.S_Transcript_6982~~S_Transcript_6982.p1 ORF type:5prime_partial len:155 (+),score=20.97,RPE65|PF03055.11|2.7e-30 S_Transcript_6982:3-467(+)
TCAAGGGAACCATTGTCAAAAAGAAACTTGGACTTGGCCGTCATAAATCCAGCTTATGTAGGGAAGAAGAACAAGTATGTCTACGCAGGTGTTGGTGACCCGTTGCCCAAATTAAGCGGGATTCTAAAGCTGGATGTATCCATGACCACGGGTGACCAAGAGTGCATAGCCGCAAGCCGGATGTTTGGGCCAGGCTGCTATGGAGGTGAGCCGATTTTCGTGGCGAGAGATCCAGATCTTGGTGCGGAGGAGGATGATGGGTATCTTGTGACTTTTATCCATGATGAGAAAACAAGGCAATCTAGGTTCATTGTGATGGATGCTAAGTCAAGTAGTCTTGACATTGTTGCTTCCGTGAAGCTACCCCAACGGGTGCCCTACGGTATTCATGGATTGTTTGTAAAAGACAAGGATCTTCAAACATTATATACCATACGTGAAGATAACATTATCCTTGGTCATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_6982.p1 GENE.S_Transcript_6982~~S_Transcript_6982.p1 ORF type:5prime_partial len:155 (+),score=20.97,RPE65|PF03055.11|2.7e-30 S_Transcript_6982:3-467(+)
SREPLSKRNLDLAVINPAYVGKKNKYVYAGVGDPLPKLSGILKLDVSMTTGDQECIAASRMFGPGCYGGEPIFVARDPDLGAEEDDGYLVTFIHDEKTRQSRFIVMDAKSSSLDIVASVKLPQRVPYGIHGLFVKDKDLQTLYTIREDNIILGH*

Click here to download the sequence:
Link to NCBI Protein BLAST