Transcript Information: S_Transcript_6983.p2


Annotated TAIR IDAT4G19170.1
Annotated Gene Namenine-cis-epoxycarotenoid dioxygenase 4
Annotated Gene Symbol(s)NCED4, CCD4
Annotation TypeHomolog
Chromosome Positionchr4:10481835-10483622 | Forward length=595
E-Value2E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1570870102252
Replicate 24.0288572235462
Replicate 31.7640877993009
Condition 2: 8 Hour
Replicate 13.5233253567437
Replicate 23.3071428423944
Replicate 32.2242623587807
Condition 3: 24 Hour
Replicate 14.5589322067327
Replicate 22.9561493360453
Replicate 33.2898318789282


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_6983.p2 GENE.S_Transcript_6983~~S_Transcript_6983.p2 ORF type:complete len:115 (+),score=10.35 S_Transcript_6983:196-540(+)
ATGGATGCCTTCTCTTCTTCTTTCCTCTCACCAATACCACAACCAAATCTCCTCCTCAGCCAGACTAAGCCTTCACTTCTGCCCACTCAGTTTCGCATAGTTTCATCACAAACATCCACTACCATCCCCTATAGACAACCCAAATCTCAAAAAATCTTTAGCAATTCTAAGCCGTTTCCTTCCGTTCTTCTAGACGCTTTAGAAAACACGATCAATAACTTCATTGATCCTCCCACAAGCCCCTCAGTTGACCCGAAACTTGTCTTCTCGGGCAATTTTGCACCGGTAGAGGAGCTCCCACCTACAGAATGCGAGGTTGTTGAGGCACCCTGCCCTCATGCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_6983.p2 GENE.S_Transcript_6983~~S_Transcript_6983.p2 ORF type:complete len:115 (+),score=10.35 S_Transcript_6983:196-540(+)
MDAFSSSFLSPIPQPNLLLSQTKPSLLPTQFRIVSSQTSTTIPYRQPKSQKIFSNSKPFPSVLLDALENTINNFIDPPTSPSVDPKLVFSGNFAPVEELPPTECEVVEAPCPHA*

Click here to download the sequence:
Link to NCBI Protein BLAST