Transcript Information: S_Transcript_70022.p1


Annotated TAIR IDAT1G11950.1
Annotated Gene NameTranscription factor jumonji (jmjC) domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:4034747-4038310 | Reverse length=875
E-Value4.2E-292
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.0299610641803
Replicate 26.6092234513252
Replicate 36.0270379358172
Condition 2: 8 Hour
Replicate 110.871767612656
Replicate 29.2606780861613
Replicate 39.0789721280476
Condition 3: 24 Hour
Replicate 110.398926018943
Replicate 27.8014863378276
Replicate 37.6105733117834


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_70022.p1 GENE.S_Transcript_70022~~S_Transcript_70022.p1 ORF type:complete len:918 (+),score=140.95,JmjC|PF02373.18|5.6e+03,JmjC|PF02373.18|8.9e-14,zf-4CXXC_R1|PF10497.5|4.6e+03,zf-4CXXC_R1|PF10497.5|2.7e-07,zf-4CXXC_R1|PF10497.5|4.3e+03 S_Transcript_70022:234-2987(+)
ATGTGTGTGCAAATGATAACCCAGATATGCCCTCGGCCCCTCTTTCATTCTGTAAAGGGTTTCTCAGTGAATATGTCAGTCGTGGTTGCTAATGAGAGTCGGATGAACAATAAAAAGCGAAGATTGTTTAAAGCCTGCAATACTTCCAGGATCAAAGTGAATAGGAAGCTTCTGGAATCTGAAAGTGAACAAGACAGGGAAATCGGTAGTAGTGTTAACTCGAGGAAGAGGGGACGCCTTTGTAAATCTGTTGACCCAATCGACTATGGTGAACTGGAAGAGGAATACAGTGTTGAAGATACTTCAGAAGTAGAGGATGCTACAGAAGATGAAGATTATGAAGCTCCAAATAATAAACAGCAAGCTAGGAGTAAAACTAAGGGAAAAATTATTAATCGATCGCAGAGAAATACAAGAGTTATTAAAGAGAAGAACCATTCTTCTGAGAAGAAACTCAATGTGATAGAAAATGCAGTTCCACCAGTGCATAAGAAAATGAGAACTATTGGTAGACAGAAGCGTTGTGCATATAGTGATTGTGACTTGAAACAACCGGGTCTAAAGAGCAATAGTTCGGGAGAATCTGATTCTCATAAGTCATCCTCCTCTTTAACATCCTATTCTCCTGTCTCGGCAAACTCAAGTTCAACAGCAAATAGTTATGGTGACAGTGCAGCAAGATCAAGAAGAAATGCTGCTGTAAATAAGAAGGTAGAAGAGCAGGTGCAGGTGAAGTGTCATCAGTGTAGGAAAAATGACTGCAGATATGCTGTTAAATGCAAAGCGTGCAAGGAAAAGCTATATTGTGTGCGATGTATCAAACAGTGGTATCCTCAACTACTCGAAGAGGAAATATCGGAAACCTGCCCCTTCTGTAGAAGGATTTGTAATTGTAACGAGTGTCTGCACTCAAGCGGTAGTATCAAGACATCAAATAAAGACATCTCTCACCATGAGAAAATTCAACATCTATGGTACCTGGTGAGATCATTGTTCCCATTTGTGCGGCAAATTAGTGAAGAGCAGTCTCGAGAAATAGAGCTTGAGGCACGGATACAAGGTGTTCCTCTGAATGAAGATGACGTGAAGGAGTCTTCTTGCTATGATGATGAGCGAATTTACTGCAATCAATGTGCAACTTCGATTTTCGATCTTCACAGAAGATGCCCTAATTGCTGTTATGAACTTTGCTTGGCTTGTTCTCAAGAGATCCGCCAAGGAAATCTCTTAGGAGGTCCAGAAGCAGTACCATTTAAGTACGCCGATAAGGGATATGTTTACATTCATGGGGGAGATCCTCTACCCGGCTGCTCTCCTCAGGAAAATACAGACGATATATTTGATTCAATGACTGAATGGAGAGCCAATATTGATGGGAGTATCCCTTGCCCCTTGGAAGAGCGGGGAGGTTGTGGTAAAGGAATTTTGGAGTTGAGGAGAATCCTTCCTAAGGGTTGGATACGGAGTCTAGGGAGAAAAGCGGAATCGCTCTTAAAAGATAAGGTTATTGAACAAGCACCTCCAAGTCCCTTTAAGAAGATTTCTCAAGCAGCTTTCCGAGAGAACTCCCATGACAATTACATCTACTGCCCATCATCTGACGAGACACTCAAACCTGATGCGCTGATGCACTTCCGACAACATTGGTCCAACGGTGAACCTGTAATTGTTCGAGATGCTCTGCAGCAAGCAGCTGGATTGAGCTGGGAACCAATGGTAATGTGGCGAGCACTTTCTGACAATGTGGATTCTAATATTAAAGCCATTGATTGCCTGGCTAACTGCGAGGTGGAAATCAGTCCTCGCCATTTCTTCAAGGGATATACAGAAGGTCGAAGATATGCTAATTTCTGGCCTGAGATGTTGAAGCTAAAAGATTGGCCTCCCTCAGATAAGTTTGACGATCTCTTACCTAGACACTGTGATGAGTTTATCAGCGCATTGCCATTCCAAGAGTACACAGATCCTCGGGGGGGAATCCTTAACCTTGGTGCAATGTTACCACCAACTATCTTGAAACCAGACTTGGGGCCGAAGACATATATAGCTTATGGTATACCCCAAGAGCTTGGAAGAGGAGATTCTGTCACTAAGCTTCATTGTGACATGTCGGATGCTTTAAATATTTTGATGCATACGGCTGATGTTACCTTAAGTGAAGATCAGGATTCGGCAATCGCTATGCTCAAAAAGCAACACAGAGCTCAAGATCAAAGGGAGTTGAATTTCATGCAAGAGGACATCAAACATGGCTCTTCTACTTCAACAGAAACAGGCGCTGCTCTTTGGGACATTTTCAGGAGGGAAGACGTACCAAAACTAGAAGCGTATCTAAGAAGACATGCAAAGGAGTTCAGGCATACTTACGGTTCTCCAGTTGAACAGGTCATCCACCCCATCCATGATCAGTCCTTCTATTTAACTGCAGAGCACAAGCGAAAACTCAAAGAGGAATATGGGATTGAACCATGGACATTTGAGCAAAGGCTCGGAGAGGCAGTATTTATACCTGCTGGCTGTCCCCATCAAGTCCGAAATCTCAAGTCATGCACAAAGGTAGCTGTAGATTTCGTCTCCCCTGAAAACGTCCAAGAGTGCCTACGGCTGACAGAGGAGTACCGGAAACTTCCAAAGTTCCACAGGGCGCGAGAAGACAAACTCGAGATCAAGAAGATGATTCTCCATGCAGTCAATCAAGCAATCAAAGAACTAGAGGAAACTGAGTTGATCACTTCAAGGCAGGAACAAAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_70022.p1 GENE.S_Transcript_70022~~S_Transcript_70022.p1 ORF type:complete len:918 (+),score=140.95,JmjC|PF02373.18|5.6e+03,JmjC|PF02373.18|8.9e-14,zf-4CXXC_R1|PF10497.5|4.6e+03,zf-4CXXC_R1|PF10497.5|2.7e-07,zf-4CXXC_R1|PF10497.5|4.3e+03 S_Transcript_70022:234-2987(+)
MCVQMITQICPRPLFHSVKGFSVNMSVVVANESRMNNKKRRLFKACNTSRIKVNRKLLESESEQDREIGSSVNSRKRGRLCKSVDPIDYGELEEEYSVEDTSEVEDATEDEDYEAPNNKQQARSKTKGKIINRSQRNTRVIKEKNHSSEKKLNVIENAVPPVHKKMRTIGRQKRCAYSDCDLKQPGLKSNSSGESDSHKSSSSLTSYSPVSANSSSTANSYGDSAARSRRNAAVNKKVEEQVQVKCHQCRKNDCRYAVKCKACKEKLYCVRCIKQWYPQLLEEEISETCPFCRRICNCNECLHSSGSIKTSNKDISHHEKIQHLWYLVRSLFPFVRQISEEQSREIELEARIQGVPLNEDDVKESSCYDDERIYCNQCATSIFDLHRRCPNCCYELCLACSQEIRQGNLLGGPEAVPFKYADKGYVYIHGGDPLPGCSPQENTDDIFDSMTEWRANIDGSIPCPLEERGGCGKGILELRRILPKGWIRSLGRKAESLLKDKVIEQAPPSPFKKISQAAFRENSHDNYIYCPSSDETLKPDALMHFRQHWSNGEPVIVRDALQQAAGLSWEPMVMWRALSDNVDSNIKAIDCLANCEVEISPRHFFKGYTEGRRYANFWPEMLKLKDWPPSDKFDDLLPRHCDEFISALPFQEYTDPRGGILNLGAMLPPTILKPDLGPKTYIAYGIPQELGRGDSVTKLHCDMSDALNILMHTADVTLSEDQDSAIAMLKKQHRAQDQRELNFMQEDIKHGSSTSTETGAALWDIFRREDVPKLEAYLRRHAKEFRHTYGSPVEQVIHPIHDQSFYLTAEHKRKLKEEYGIEPWTFEQRLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVQECLRLTEEYRKLPKFHRAREDKLEIKKMILHAVNQAIKELEETELITSRQEQR*

Click here to download the sequence:
Link to NCBI Protein BLAST