Transcript Information: S_Transcript_70088.p1


Annotated TAIR IDAT1G50410.1
Annotated Gene NameSNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:18672828-18677365 | Forward length=981
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.8626446962326
Replicate 27.0786463754001
Replicate 36.5240757443816
Condition 2: 8 Hour
Replicate 16.4521976188035
Replicate 26.482519212791
Replicate 37.2481675585494
Condition 3: 24 Hour
Replicate 17.0486689873672
Replicate 26.836433108039
Replicate 35.5562273323885


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_70088.p1 GENE.S_Transcript_70088~~S_Transcript_70088.p1 ORF type:complete len:1094 (+),score=217.91,SNF2_N|PF00176.19|4.5e-72,Helicase_C|PF00271.27|2.2e-15,zf-C3HC4_3|PF13920.2|4.2e-06,zf-C3HC4_2|PF13923.2|9.5e-06 S_Transcript_70088:354-3635(+)
ATGCCTGACACAGAAGAACATCTGAATGGCTTCATTGAATCTACCCGCCGATTTTGCTCTCTCTTTAGTGAATGGATTTGCAGCTTAGGAAATTTCACTAATCTGGTTAAACATTCTTCTATTGGTTCAAATTTTAGGTTGATAAAAGAACACAGAAGTCATTCTTCATTGTTCTTGAATAGAATGGAACTTATTGACATCTCCTCCTCAGACTCAGATAGTATACTCGAGTCTGATGATGAACCACAGATCGTATCTTCTTCTCAAAATTTGTCTGCTGCTTTATCCTCTAGAAGGAAACTACCAGATTCGTTTTCAAGATCACATACAAACTCGACGGGTCCCCAAAATTTAAAACCTCATTCTCCCAACATAGGGTCCACTAGTAGAGGAGAATTTTTTGCTGGAGGCTATCGATCTCAGGCTGGACCTGGTCCAAGCACTAGCTATGGTACTGGTGGTCGAGACTCAAGTTCTCACATTAGCAGGCATGAGTTTCAGTCTTCTAAAGAGAATGGAAGTATTTTCCAGTCAAAAAAAGATGATGGTCGGAATAATAGGAGTCTTCCATCTTCTTTTCAGTCTTCTGGGGTACGTAACAATTTTCATAGTGGAGATAATAGAGGGTTTTACCATCCAGTAGAGCTGAGCTCCACTACTTATGGAAGAGACAGTTTTAGCAGGGACAGGGAGGATGATGTTCGTATCCACGATAGACACGAACATAATCGTCGCATTCTTCCTCCTCCTTTGAGCCGTGGAAAGTCTGTTTCCTCAGCACCATATGCTAGTGCAAGTGATCCCCTTCAGAACATTGGTTTTGGGGAAGAGAGGGTCACAGGAGATGAAAGAGTGATCTTTCAAGCAGCATTACAGGATCTTAGTCAGCCGAAAACTGAACTTGACATTCCTCCAGGGACCTTATCTATCCCTCTTTTGAGACACCAGAAAATTGCTCTAGCTTGGATGGTTCAGAAGGAGTCAACTGTGCATTGCTTAGGTGGAATTCTTGCTGATGATCAGGGACTGGGTAAGACTATTTCAACAATAGCACTCATACAAGAGCAGAGGTCTTTGCAGAGGAAGTCACAATCTGAGGAGAAAGAAAATCACAGTGCTGTAGCGCTGAATTTGGATGATGATGATGATGATGACAAAGGTAGTGCCAGTTTACAGGCTGTCAATAAAACAGAGGATCCTAATAGTGCCACATGTAAATCTGAGGAGCTGTGCAATGCCAAAACAGAAACCTTGAATTTGGATGACGATGATGATAATGGAAGTGCCAGTTCAGAAACTGTTAAAAAGATGGAGAATGGTGGTGGTCCAAAACGTAATTCAGGTGCTAGTTCTTCAAGTCAAAATATTAAGAGGCAGAGACCACCTGCAGGTACGCTGATTGTGTGTCCAGCAACTGTTCTGAGGCAATGGGCTAGGGAATTGGATGACAAAGTTACCGAGGAAGCAAGACTTTCTGTTTTGGTGTACCATGGGGGCAATAGGACTAAGAATGTGACTGAGTTGGCTAAATATGATGTGGTGCTTACCACTTATTCTATTGTAAGCAATGAGGTTCCTAAACAGCCTATAGTTGACGAAGATGATGTTGAGCCAAAACTTGGGGAGAAATATGGATTGTCTTCTGACTTTTCTATTAACAAAAAGAGGAAACATCCATTTACCACCAGTCAAAAGGGAAAGAAAGGTAGAAAACTAGCTCATAGCTCATTGGATGGCCCTAGTGGTGCACTTGCCCGAGTGAGTTGGTTTAGAGTGGTACTAGATGAAGCTCAAACAATAAAAAATCATAGAACCCAAACAGCTAGAGCATGCTGTGGACTGAGAGCTAAAAGACGATGGTGCTTATCTGGAACTCCTATACAGAACTCAGTTGATGAATTGTACAGTTACTTCAGATTTCTTAGACATGGTGTATATTCTGATTACAAGACATTTTGTGAGGCAATAAAAATTCCTATTTCCAGAGATCCTAATATTGGGTACAAAAAGCTTCAAGCAGTTCTGAAGACTATACTGTTGCGCCGTACAAAAGATACATTACTTGATGGAGAGCCTATTATAAGCTTACCCCCGAAATTTGTAAACATGAAGACGGTGACTTTTACCGGTGAGGAGCGAGCCTTTTATGCCCAATTAGAGGCTGAATCTCGCTCTCAGTTCAAGGCATATGCTGCTGCCGGCACAGTTAATCAGAACTACGCCAACATTCTGTTGATGATTTTACGCCTTCGCCAGGCGTGTGATCACCCACTTCTTGTCAAAGGGTTCAATTCAGACTCTGGTAGAAGAACAAATCTAGAGAAGGCTAGGAAACTCCCAAGGCAAGTGTTGATGGATTTGTTACGTCGTCTGGAGGCACCCTCTGCCCTTTGTCTCATATGCAGTGACCCAGCAGAAGATGCTGTGATAACCATATGTCGCCATGTTTTTTGCTACCAATGTGTGGCAGACTACCTCACTGGTGATGACAATATTTGTCCAGCTAGGTGCAAGGAGCAATTGAGTGATGATGTTCTTTTCTCTGAGGCTACTCTAAGAAGCTGTCTCATGAGTGATGCTGATGGAAATTTGTTGAATGATGATGGTAGTCGTAAGAGTACATCGATACTGAGTAGTGAATACAGTTCCTCTAAAATTAAAGCAGCTCTGGAGATCTTGCAGTCACATTGTAAAGCAAACAGTTTATGTATAGATCTGGATGATTTTGGTGAGTCAGAGACGCAGATTTCTGTGCGTGCATCAAGAGCTCATGAAACAGAGAGTCCATCCTCTCAAGCACCAATAAAAACCATTGTTTTCTCCCAGTGGACTCGTATGCTGGACTTATTTGAGCTTTCACTTAATCAACATTGCATCCAGTACAGGAGGCTTGATGGTAGCATGACTCTAGTTGCTAGAGACAGGGCTGTCAGAGAGTTCAATACGGATCCTGAGGTGACTGTTATGCTGATGTCCCTAAAAGCCGGAAATCTTGGGTTAAACATGGTTGCTGCTTGCCATGTTATCCTGTTAGATCTTTGGTGGAATCCGACAACAGAAGACCAAGCTATTGACCGGGCACATCGTATTGGTCAAACTCGACCAGTTACTGTATCGAGGATTACTATAAAAGATACTGTGGAGGACCGGATATTAGCTCTCCAGGAGGAAAAGAGAAAAATGGTGGCATCTGCCTTTGGTGAAGACCGGGTTGGCAGTTCTGCAACTCGACTCACTATAGATGATCTCAGATATATATTCCTGGGAAGTCGAGCTTTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_70088.p1 GENE.S_Transcript_70088~~S_Transcript_70088.p1 ORF type:complete len:1094 (+),score=217.91,SNF2_N|PF00176.19|4.5e-72,Helicase_C|PF00271.27|2.2e-15,zf-C3HC4_3|PF13920.2|4.2e-06,zf-C3HC4_2|PF13923.2|9.5e-06 S_Transcript_70088:354-3635(+)
MPDTEEHLNGFIESTRRFCSLFSEWICSLGNFTNLVKHSSIGSNFRLIKEHRSHSSLFLNRMELIDISSSDSDSILESDDEPQIVSSSQNLSAALSSRRKLPDSFSRSHTNSTGPQNLKPHSPNIGSTSRGEFFAGGYRSQAGPGPSTSYGTGGRDSSSHISRHEFQSSKENGSIFQSKKDDGRNNRSLPSSFQSSGVRNNFHSGDNRGFYHPVELSSTTYGRDSFSRDREDDVRIHDRHEHNRRILPPPLSRGKSVSSAPYASASDPLQNIGFGEERVTGDERVIFQAALQDLSQPKTELDIPPGTLSIPLLRHQKIALAWMVQKESTVHCLGGILADDQGLGKTISTIALIQEQRSLQRKSQSEEKENHSAVALNLDDDDDDDKGSASLQAVNKTEDPNSATCKSEELCNAKTETLNLDDDDDNGSASSETVKKMENGGGPKRNSGASSSSQNIKRQRPPAGTLIVCPATVLRQWARELDDKVTEEARLSVLVYHGGNRTKNVTELAKYDVVLTTYSIVSNEVPKQPIVDEDDVEPKLGEKYGLSSDFSINKKRKHPFTTSQKGKKGRKLAHSSLDGPSGALARVSWFRVVLDEAQTIKNHRTQTARACCGLRAKRRWCLSGTPIQNSVDELYSYFRFLRHGVYSDYKTFCEAIKIPISRDPNIGYKKLQAVLKTILLRRTKDTLLDGEPIISLPPKFVNMKTVTFTGEERAFYAQLEAESRSQFKAYAAAGTVNQNYANILLMILRLRQACDHPLLVKGFNSDSGRRTNLEKARKLPRQVLMDLLRRLEAPSALCLICSDPAEDAVITICRHVFCYQCVADYLTGDDNICPARCKEQLSDDVLFSEATLRSCLMSDADGNLLNDDGSRKSTSILSSEYSSSKIKAALEILQSHCKANSLCIDLDDFGESETQISVRASRAHETESPSSQAPIKTIVFSQWTRMLDLFELSLNQHCIQYRRLDGSMTLVARDRAVREFNTDPEVTVMLMSLKAGNLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVSRITIKDTVEDRILALQEEKRKMVASAFGEDRVGSSATRLTIDDLRYIFLGSRAL*

Click here to download the sequence:
Link to NCBI Protein BLAST