Transcript Information: S_Transcript_70171.p1


Annotated TAIR IDAT4G00335.1
Annotated Gene NameRING-H2 finger B1A
Annotated Gene Symbol(s)RHB1A
Annotation TypeOrtholog
Chromosome Positionchr4:146866-147962 | Forward length=190
E-Value2.1E-58
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 122.703034229064
Replicate 220.598907785926
Replicate 321.152332380243
Condition 2: 8 Hour
Replicate 114.452752679384
Replicate 214.101686583335
Replicate 317.072882678871
Condition 3: 24 Hour
Replicate 129.195531489799
Replicate 220.730405849455
Replicate 321.755507496356


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_70171.p1 GENE.S_Transcript_70171~~S_Transcript_70171.p1 ORF type:complete len:211 (+),score=49.21,zf-RING_2|PF13639.2|1.6e+04,zf-RING_2|PF13639.2|8.6e-12,zf-rbx1|PF12678.3|5.3e-10,zf-C3HC4|PF00097.21|1e-08,zf-RING_5|PF14634.2|3.2e-07,zf-RING_11|PF17123.1|1.6e-06,zf-RING_11|PF17123.1|6.6e+03,zf-RING_UBOX|PF13445.2|4.9e-06,zf-RING_UBOX|PF13445.2|2.2e+02,zf-ANAPC11|PF12861.3|1.3e-05,zf-C3HC4_2|PF13923.2|1.6e+04,zf-C3HC4_2|PF13923.2|5e-06 S_Transcript_70171:295-927(+)
ATGGGAGGTTGCTGTTGCTCTTCCAAAAAAGCTCAATTACATGGGACACCTGTGTATTACTATTGTCCACCATCTTTGGAAGAGCAGGAGATATTGAGACCATACGGTAGGACAGCCTCAGCACTGCCTGCAGGCATCCTTGTTGGACTGAATTTGGACACATCAAGCCCCGACACTTTCCGCCCCCCTCCTGCACCTCTCCCTTTTAATGTAGTTTTCGGACGCCCTCAAACTCCAATTCGATCGCTCCAAGGGGCCAAATGTGATGCAGCCAGACAAATTGAATCTGGAACAATTGGAGAGAATGCTGGTACTGATAGCTGCGAGACACTGAATCCAAGTGGCCATGCTGATAAACCAGAAGGAAAAACCCTTGCTGATATCTTGCTTTCATCACCCACAAAGTCTGATGTTGAAATTTCAAAGCCATCTGAGCCTCATCATTTAGCCATTGAGGAAGAAGATGCCTGCCCTATCTGTCTTGAAGAATATGACACAGAAAATCCAAAAATGATTACGAACTGTGAGCACGATTTTCATTTGTCATGCCTTCTTGAGTGGATGGAGAGAAGTGATGCCTGCCCAGTTTGTGATAAGGAAATGATATTTGATCACCCTGATGATCAGCTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_70171.p1 GENE.S_Transcript_70171~~S_Transcript_70171.p1 ORF type:complete len:211 (+),score=49.21,zf-RING_2|PF13639.2|1.6e+04,zf-RING_2|PF13639.2|8.6e-12,zf-rbx1|PF12678.3|5.3e-10,zf-C3HC4|PF00097.21|1e-08,zf-RING_5|PF14634.2|3.2e-07,zf-RING_11|PF17123.1|1.6e-06,zf-RING_11|PF17123.1|6.6e+03,zf-RING_UBOX|PF13445.2|4.9e-06,zf-RING_UBOX|PF13445.2|2.2e+02,zf-ANAPC11|PF12861.3|1.3e-05,zf-C3HC4_2|PF13923.2|1.6e+04,zf-C3HC4_2|PF13923.2|5e-06 S_Transcript_70171:295-927(+)
MGGCCCSSKKAQLHGTPVYYYCPPSLEEQEILRPYGRTASALPAGILVGLNLDTSSPDTFRPPPAPLPFNVVFGRPQTPIRSLQGAKCDAARQIESGTIGENAGTDSCETLNPSGHADKPEGKTLADILLSSPTKSDVEISKPSEPHHLAIEEEDACPICLEEYDTENPKMITNCEHDFHLSCLLEWMERSDACPVCDKEMIFDHPDDQL*

Click here to download the sequence:
Link to NCBI Protein BLAST