Transcript Information: S_Transcript_7028.p2


Annotated TAIR IDAT4G10340.1
Annotated Gene Namelight harvesting complex of photosystem II 5
Annotated Gene Symbol(s)LHCB5
Annotation TypeOrtholog
Chromosome Positionchr4:6408200-6409496 | Forward length=280
E-Value1.3E-101
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1509.01800362489
Replicate 2495.08899767063
Replicate 3561.3968863848
Condition 2: 8 Hour
Replicate 1206.14543973229
Replicate 2234.00953677154
Replicate 3213.58479300191
Condition 3: 24 Hour
Replicate 1524.27720377426
Replicate 2583.81978620671
Replicate 3555.38941780066


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_7028.p2 GENE.S_Transcript_7028~~S_Transcript_7028.p2 ORF type:internal len:150 (+),score=38.44,Chloroa_b-bind|PF00504.17|3e-32 S_Transcript_7028:3-449(+)
TTGGACCGCTCCGAGATCCCTGAGTACCTCACCGGAGAAGTCCCCGGAGACTACGGTTATGATCCTTTTGGTCTGAGCAAGAAGCCAGAGAACTTGGCCAAGTACCGTGCATATGAGCTTATCCACGCCCGGTGGGCTATGCTTGGAGCAGCTGGGTTCATCATTCCAGAGGCTTTCAACAAATTCGGTGCTAACTGTGGCCCTGAAGCTGTTTGGTTCAAGACTGGTGCCCTGCTCTTGGATGGAAACACCCTTAACTACTTTGGGAAGAACATCCCCATCAATCTCATCGTCGCTGTCGTTGCTGAGGTTGTTCTTGTTGGTGGTGCTGAGTACTACAGAATCATCAATGGCTTGGATTTGGAGGACAAGCTTCACCCAGGAGGCCCATTTGACCCATTGGGCTTGGCAAAGGACCCAGACCAGGCAGCATTGTTGAAGGTGCAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_7028.p2 GENE.S_Transcript_7028~~S_Transcript_7028.p2 ORF type:internal len:150 (+),score=38.44,Chloroa_b-bind|PF00504.17|3e-32 S_Transcript_7028:3-449(+)
LDRSEIPEYLTGEVPGDYGYDPFGLSKKPENLAKYRAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLIVAVVAEVVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLAKDPDQAALLKVQ

Click here to download the sequence:
Link to NCBI Protein BLAST