Transcript Information: S_Transcript_70387.p1


Annotated TAIR IDAT4G15093.1
Annotated Gene Namecatalytic LigB subunit of aromatic ring-opening dioxygenase family
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:8618454-8619472 | Forward length=269
E-Value2E-90
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 131.578113405923
Replicate 240.914949291361
Replicate 327.732920304817
Condition 2: 8 Hour
Replicate 135.568841312531
Replicate 237.147285987606
Replicate 333.007749089803
Condition 3: 24 Hour
Replicate 123.393587917166
Replicate 226.469302326107
Replicate 327.857183372815


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_70387.p1 GENE.S_Transcript_70387~~S_Transcript_70387.p1 ORF type:complete len:268 (+),score=59.09,LigB|PF02900.14|6.5e-57 S_Transcript_70387:261-1064(+)
ATGGGTGAGAAAGAATTGATCAAGGAGACATTCTACTTATCTCATGGGACACCAATGTTGACCATTGATGAGACAATTGAAGCAAGGAGCTTCTTTCAGGGATGGAAAGAGAAAGTCTACTCAAAGAAGCCAAAGTCCATTCTTGTGGTATCTGCTCACTGGGAAACTCATGTTCCCACTGTCAATGCTGTTGATCACTCCGATCTCATCTATGATTTTTGTGGCTTCCCAGCTCGGATGTACCAGATCAAGTATCCATCACCTGGAGCTCCAGATTTGGCGAGAAGGGTACAAGAACTTCTCACCGAATCAGGGTTCGAATGTGCAGTAGATAGGAAGCGCGGACTTGACCATGCCTCATGGGTGCCTCTCATGTTCATGTACCCTGAGGCCAATATCCCCGTTTGTCAGCTTTCTGTTCAATCTCACTTGGATGGTACACACCACTATAAGTTGGGAAGAGCATTGGCCCCTCTTAAGGAGGAAGGTGTCCTTATCATTGGCTCTGGAAGTGCTGTACATCCTTCTAACAACACCCCTCATTGTTACGAAGGAGTTGCTCCTTGGGCTGCTGAGTTTGATAATTGGCTGGAAGGAGCTCTAATTAGTGGAAGGTATGAAGATGTGAATAATTATCAAGCAAAAGCCCCTAACTGGAAAGTAGCACATCCTTGGCCAGAGCACTTCTACCCATTGCATGTAGCCATGGGTGCTTCTGGTGAAAACTCCAAGGCAGAGCTGATTCACCGCAGCTGGGACCATGGTACGCTGGGCTACGCCTCATACAAGTTCACTTCCAGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_70387.p1 GENE.S_Transcript_70387~~S_Transcript_70387.p1 ORF type:complete len:268 (+),score=59.09,LigB|PF02900.14|6.5e-57 S_Transcript_70387:261-1064(+)
MGEKELIKETFYLSHGTPMLTIDETIEARSFFQGWKEKVYSKKPKSILVVSAHWETHVPTVNAVDHSDLIYDFCGFPARMYQIKYPSPGAPDLARRVQELLTESGFECAVDRKRGLDHASWVPLMFMYPEANIPVCQLSVQSHLDGTHHYKLGRALAPLKEEGVLIIGSGSAVHPSNNTPHCYEGVAPWAAEFDNWLEGALISGRYEDVNNYQAKAPNWKVAHPWPEHFYPLHVAMGASGENSKAELIHRSWDHGTLGYASYKFTSR*

Click here to download the sequence:
Link to NCBI Protein BLAST