Transcript Information: S_Transcript_70502.p1


Annotated TAIR IDAT4G18520.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:10215250-10217103 | Reverse length=617
E-Value8.2E-229
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.81952515959227
Replicate 21.0012286995307
Replicate 30.86683848691153
Condition 2: 8 Hour
Replicate 14.0438746630544
Replicate 23.3720938792457
Replicate 33.7311370199967
Condition 3: 24 Hour
Replicate 11.2037699168237
Replicate 20.91830678996545
Replicate 31.0219629013418


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_70502.p1 GENE.S_Transcript_70502~~S_Transcript_70502.p1 ORF type:complete len:617 (+),score=73.68,PPR_2|PF13041.2|0.00057,PPR_2|PF13041.2|1.2e-06,PPR_2|PF13041.2|0.013,PPR_2|PF13041.2|3.8e-10,PPR_2|PF13041.2|0.82,PPR_2|PF13041.2|2.7e-07,PPR_2|PF13041.2|2.1e+02,PPR_2|PF13041.2|4e-11,PPR_2|PF13041.2|0.0023,PPR_2|PF13041.2|7.6e-08,PPR|PF01535.16|0.00026,PPR|PF01535.16|0.00055,PPR|PF01535.16|1.2e+03,PPR|PF01535.16|0.0032,PPR|PF01535.16|4.8e-06,PPR|PF01535.16|0.018,PPR|PF01535.16|3.7e-07,PPR|PF01535.16|21,PPR|PF01535.16|2.6e-06,PPR|PF01535.16|3.1e+02,PPR|PF01535.16|0.0014,PPR|PF01535.16|9.6e-07,PPR_1|PF12854.3|0.35,PPR_1|PF12854.3|2.1,PPR_1|PF12854.3|0.27,PPR_1|PF12854.3|0.0058,PPR_1|PF12854.3|42,PPR_1|PF12854.3|0.018,PPR_1|PF12854.3|1.9e+02,PPR_1|PF12854.3|0.057,PPR_1|PF12854.3|21,PPR_1|PF12854.3|0.02,PPR_1|PF12854.3|0.0057,PPR_3|PF13812.2|4.1,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|89,PPR_3|PF13812.2|0.51,PPR_3|PF13812.2|0.1,PPR_3|PF13812.2|4.3,PPR_3|PF13812.2|35,PPR_3|PF13812.2|1.5e+02,PPR_3|PF13812.2|0.15,PPR_3|PF13812.2|2.8e+02,PPR_3|PF13812.2|0.009,PPR_3|PF13812.2|0.13 S_Transcript_70502:128-1978(+)
ATGCTATCTTTCTTGCCAACCTTAATTCCACCTTCTTTTCATAACCTTCAATTCCAATTCCCATCATCAATACATACACATTACTTTAAAACCCAAAGTCTTCTTACCCATCAAATTTCCTCAACTATTCACAATGTTCGTTGCCAATTTTCGCCAAATTCTGTTAGTGCATCGAATTTCGCCGATATCCAGATCAGTGAAGAGAACCCAGTTACTAAAGTTTCGATGCTTCAGTCATTTGACAGAAGGGTCGATCCGATTTCGCTAGCTACTCTGCTTCAATCACGCCATAGATTAGTAGAAGTTAAAGTTATACATGCTGTGGTTTTGAAGTCTTTGGTGGACTCAATAGTGTTTGTAAATAACAATTTGATTAGTGTTTACTTAGGTTTTGGCAAGTTGTCGGAAGCTCGCAAGGTGTTCGATGAAATGCCTGAGAGAAATATTGTTTCTTGGACTGCAATGCTTAATGGGTATTTAAGGTTTGATTTAGAGGATGAAGCTTTTAGACTTTTACATGAGTTTTCGAAGTCCAAGATTAAAGCAAACGGGATGACGTATGTGTGTGTGTTGAATTTATGTGGCAAGAGGTTGGATTATGAGCTTGGTAGACAGGTCCATGCTTGTATTATTAAAGGTAGATGGAGCAATTTGATTGTTGATACTGCTCTCTTGCACTTCTATGCACAATGTGGTGACTTACCGAGTGCTTTCCAGCTGTTTAATTTGATGAAAGAACGGGATGTTGTTAGTTATACGACCATGATCACTTCGTGCTCTCAACAAGGCTATGGAAATGAGGCCTTCTCCATGTTTTCAAGAATGTTAGTGGATGCATGTTTTCCAAATGAACACACTATATGTAGTGTTTTGAAGGCGTGTGGAGATCAAAAGGCTCTGAAATTCGGGAGACAGTTGCATGGTATTGTGGCTAAAAAAGTAATTAGAAATGATGTTTTTATTGGTACTTCCCTTGTTGGTATGTATGCGGGATGTGGTGAAATTGAGGATTCTAGAAAGGTGTTTGACAGGATGAAAAGGCGGAACATGGTTACATGGACTTCAATAATTATGGGGTATGCTAGAAATAAGCTTGGATATGAGGCATTGTCTCTTTTTCGAGTGATGAAAAGACGAAAAGTGGTGGCAAATAATTTGACAATTGTAAGCATCCTCCAAGCCTGTGGTTCTATAGGGGCTCTGTTAACTGGCAAGGAAGTCCATGCTCAAGTGCTGAAGGTCTCAGCTCAGAATAATATTTACATAGGAAGCACTCTTGTGTGGTTTTACTGCAAATGCAGGGATTACACTCTAGCCACAAAGGTTCTTCAAAACATGCCTCTTAGAGATGTTGTCTCCTGGACTGCCATAATCTCTGGTTGTGCTCATTTAGGGTATGAGTTTGAGGCTCTTGAATTTTTGAAAGAAATGCTGGGGGAAGGTGTAGACCCTAATCCTTTTACATACTCTTCAGTTCTGAAAGTTTGTGCAAAATTAGAAGCTATCCAGCATGGAAAACTTATACACTCCTCTGTGAACAAATCCCCTGTTTTTTCAAACAATATCTTTGTGGGGAGCGCTCTAATAAATATGTATGCCAAGTGTGGATCTGTTTCGGACGCATTTCAAGTCTTTACCAGCATGCCAGAGAGGAACTTGGTTTCTTGGAGATCTATGATTGTAGGATACGCAAGGAACGGATACTGCCAGGAAGCGCTAAAGCTTATGTACCAGATGCAAGCAGAAGGAATCGAAGTGGATGATTACATCGTGACAACTGTTCTTAGTGCTTGTGGAGATGTAGAATGGAACATGGAACCATTATCTCAACATTTCTTACAGCTAAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_70502.p1 GENE.S_Transcript_70502~~S_Transcript_70502.p1 ORF type:complete len:617 (+),score=73.68,PPR_2|PF13041.2|0.00057,PPR_2|PF13041.2|1.2e-06,PPR_2|PF13041.2|0.013,PPR_2|PF13041.2|3.8e-10,PPR_2|PF13041.2|0.82,PPR_2|PF13041.2|2.7e-07,PPR_2|PF13041.2|2.1e+02,PPR_2|PF13041.2|4e-11,PPR_2|PF13041.2|0.0023,PPR_2|PF13041.2|7.6e-08,PPR|PF01535.16|0.00026,PPR|PF01535.16|0.00055,PPR|PF01535.16|1.2e+03,PPR|PF01535.16|0.0032,PPR|PF01535.16|4.8e-06,PPR|PF01535.16|0.018,PPR|PF01535.16|3.7e-07,PPR|PF01535.16|21,PPR|PF01535.16|2.6e-06,PPR|PF01535.16|3.1e+02,PPR|PF01535.16|0.0014,PPR|PF01535.16|9.6e-07,PPR_1|PF12854.3|0.35,PPR_1|PF12854.3|2.1,PPR_1|PF12854.3|0.27,PPR_1|PF12854.3|0.0058,PPR_1|PF12854.3|42,PPR_1|PF12854.3|0.018,PPR_1|PF12854.3|1.9e+02,PPR_1|PF12854.3|0.057,PPR_1|PF12854.3|21,PPR_1|PF12854.3|0.02,PPR_1|PF12854.3|0.0057,PPR_3|PF13812.2|4.1,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|89,PPR_3|PF13812.2|0.51,PPR_3|PF13812.2|0.1,PPR_3|PF13812.2|4.3,PPR_3|PF13812.2|35,PPR_3|PF13812.2|1.5e+02,PPR_3|PF13812.2|0.15,PPR_3|PF13812.2|2.8e+02,PPR_3|PF13812.2|0.009,PPR_3|PF13812.2|0.13 S_Transcript_70502:128-1978(+)
MLSFLPTLIPPSFHNLQFQFPSSIHTHYFKTQSLLTHQISSTIHNVRCQFSPNSVSASNFADIQISEENPVTKVSMLQSFDRRVDPISLATLLQSRHRLVEVKVIHAVVLKSLVDSIVFVNNNLISVYLGFGKLSEARKVFDEMPERNIVSWTAMLNGYLRFDLEDEAFRLLHEFSKSKIKANGMTYVCVLNLCGKRLDYELGRQVHACIIKGRWSNLIVDTALLHFYAQCGDLPSAFQLFNLMKERDVVSYTTMITSCSQQGYGNEAFSMFSRMLVDACFPNEHTICSVLKACGDQKALKFGRQLHGIVAKKVIRNDVFIGTSLVGMYAGCGEIEDSRKVFDRMKRRNMVTWTSIIMGYARNKLGYEALSLFRVMKRRKVVANNLTIVSILQACGSIGALLTGKEVHAQVLKVSAQNNIYIGSTLVWFYCKCRDYTLATKVLQNMPLRDVVSWTAIISGCAHLGYEFEALEFLKEMLGEGVDPNPFTYSSVLKVCAKLEAIQHGKLIHSSVNKSPVFSNNIFVGSALINMYAKCGSVSDAFQVFTSMPERNLVSWRSMIVGYARNGYCQEALKLMYQMQAEGIEVDDYIVTTVLSACGDVEWNMEPLSQHFLQLS*

Click here to download the sequence:
Link to NCBI Protein BLAST