Transcript Information: S_Transcript_70657.p1


Annotated TAIR IDAT1G11720.2
Annotated Gene Namestarch synthase 3
Annotated Gene Symbol(s)SS3
Annotation TypeOrtholog
Chromosome Positionchr1:3951597-3956840 | Forward length=1094
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 122.892467067084
Replicate 232.243022477865
Replicate 331.785189155541
Condition 2: 8 Hour
Replicate 150.9267915442
Replicate 247.990948036938
Replicate 348.673085172872
Condition 3: 24 Hour
Replicate 140.869457347949
Replicate 234.7661830751
Replicate 334.779060466948


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_70657.p1 GENE.S_Transcript_70657~~S_Transcript_70657.p1 ORF type:complete len:1309 (+),score=333.72,CBM53|PF16760.1|8.3e-25,CBM53|PF16760.1|2.6e-25,CBM53|PF16760.1|7e-25,Glyco_transf_5|PF08323.7|9e+03,Glyco_transf_5|PF08323.7|1.9e-46,Glycos_transf_1|PF00534.16|1e-06,Glyco_trans_4_4|PF13579.2|4.6e-06 S_Transcript_70657:348-4274(+)
ATGGAGGTTACTTTGCAAGCACAAAGACCATTTTTGTGCAGGCAAAGTCATAAGCAAAATGCCCACTTGAATTTTAGACCTTATATTGGGTTGTTCTCTCATAGAACTTCTACTAAATACTCTCAATCTTATTCTTGGCATGTAGAGTACTCAGCTAATGGGATTTTCCGCCCATTTTCTGCCACTGGAGACTTTTCAAGGAGGAGACAGAAAAGATGGTCAACACCGAGGTCCAAAGGCCCTGCTCCGAAAGGGTTTGTACCTAAGTCTCCAGTTGGAACAGGCTCACAAAAGAAGGAGAAAAGAAACACTGAAGACAACAAAACTTCTGCTACTCCTGCTCCCAAGCCTGATACTGGAACATCTGGTATAGAAACCAGTGGTGCTGATGACAGAGGAGTATCAGAGGCTTCTCAAGCGAATAGAAATGAGCAACATCAGGCAGGTGGTACTAATGGAAAAGTCGGAGACTTGTCGCCAGCCAATGAAGCTGTGGCTATTTCTACAAATCTGTTGAAAGAAGTTGAAAGTGTTAGAGGGTTTATAGGAAAAGGGAAAAGCACTGCGGATGTGGATGTTGTTGAAGAGGGTTCTAGTTCTACCACTGAAAACTATGAAATCATCGAAACCGAGGATAATGTCACTGATCATGATATGGTGGAATCTGATATGAAGGGTTCTGCTACAATTATTAGTGATGAGAAAGATGATGATGATTTGGAACATATTACGCAGAATCCGACACCAGCAAACTATCAAAGCATTGAAGCTGACAATTATGGGGCTGAAGTGTTGGATTCAGAACCAAGACGTTTCGATATAACCGCTGTTGAAAAGGAAGTGAAGGATTTAGTTAATACTATTCAAGAGAATTTGGCTGTGGTAAACTATCATAGTATTGTATCGAACAAGGATTTCTCTGAAAATGAAGTGTTGGCAACAGAGTCTCTTGATGCTGACATCGGTGATGAGAGGGAAGCAAAGGAAGCAGTTAGTCTGCAGGAGAATGTGGATTTAGTTAGTCTTCAAGAGAATGTGGATTTGGTAAACATTGAAAGCATGAAATCTGAAGATGTAGCTGAAACTAATGTGCTGGGATCAGAAACAATGGATAATATAACCAGTGATGTGAAGGCATTGGAGGATTCATTGCGAAAATTGGAGTTGGAAAAGGCAGCACTTGAGCATAAACAAGTGCTTGAGAAACTGGCTGAGGAAAACTTCTCAAAAGGCAACAAAATTTTCATCTATCCTGGGACAGCAAGGTCGGATGGTGACATAGAAGTATTCCTTAATAGAAGTATCTCCTCTCTTAAGAATGAACCAGATGTGTTGGTAATGGGAGCGTTTAATGATTGGCGCTGGAAGTCGTTTACCACAAAATTGGAGAAAACTCACCTAAGAGGTGATTGGTGGTCTTGTCAGATTCATGTTCCCAGGGAAGCATACAAATTAGATTTTGTATTCTTTAATGGAAAAGATGTCTATGACAATAATGACAAGAAAGATTTCCACATATCTGTGGAAGGAGGCATGGACGTCGCAACTTTTGAAGATTTTTTGCTCGAGGAGAAACGTAGAGAACTTGAGGACCTGGCCAGGCAACAAGCTGAGAGGGAGAGACTAGCAGAGGAGCAGAGGCGCAGGGAAGAAGAGAAGGCTGCAGCTGAAGCTGATCGTGCGCAGGCAAGGATAGAAGTGGAGAAAAAGAGAGAAAAGCTGAGTATGTTGATGAACAAGGCCTTACCATTCTTAGAAAATGTCTGGTTCTTTGAGCCTCGGGTGTTTGAAGGTGGTGACTTGGTTCGTTTGTATTATAAGCGGAGCTCTGGTCCTCTTGCTCAATCAAATGATCTTTGGATTCATGGGGGTCATAATGGTTGGGAAGGTGGGCTATCAATTGTTGCAAGGTTAGTGAAATCTGAAGAAAAGGATGGTGACTGGTGGTACGCTGAAGTTACAATTACTGATCAAGCATTTGTCTTGGACTGGGTTTTTGCTGATGGACCACCTCAGAATGCTTCCCGCTATGATAATAACAAATCCCAGGATTTTCATGCTGTTGTTCCCAAATCCATGTATGATGAGCTGTACTGGGTTGAGAAAGAACAAAGGATATACCAGAGGCTTCAGGAGGAAAGGCGAGCACATGAAGAGGCTATACGTGCCAAGGCTGATAAGACAGCTCGCATGAAAGCTGAAACAAAAGAGCAAACTTTGAAGACATTTCTGCTGTCTCAAAGACACATTGTTTACACTGATCCTGTTGATGTTCAAGCTGGGCGTGATGTTACAGTGTATTACAATCCATCTAACACAGTGTTGAATGGGAAACCTGAAGTTTGGTTTAGATGTTCCTTCAATCGGTGGACCCATCGTAGAGGTCCATTGTCCCCTCAGAAAATGTTGCCTGCAGAGAATACTTCTCATGTCAGCACAACTGTAAAAGTGCCACTGGATGCTTATATGATGGACTTTGTTTTTTCTGAGAGAGAAGATGGTGGAATTTTTGACAATAAAAATGGTATGGATTATCATGTACCTGTCTTTGGTGGGATCGCTAAAGAGCCACCAACGCATATCGTGCATATTGCTGTTGAAATGGCCCCTATTGCTAAGGTTGGTGGGCTTGGAGATGTTGTTACTAGCTTGTCTCGTGCTGTTCAAGATTTGAACCATCATGTTGACATAATTTTTCCAAAGTACGATTGCTTGAACCTTAGCCATGTAAAGGACTTGCATTACGAGAGGAGCTATTCATGGGGTGGCACTGAGATAAAAGTTTGGTTTGGGAAGGTTGAAGGCCTTTCTGTCTACTTTTTGGAGCCTCAAAATGGATTGTTTTGGACTGGGTGTGTCTATGCTGGTAGAAACGACGGTGAGAGATTTGGCTTCTTTTGCCACGCTGCGCTTGAATTTCTTCTCCAAAGTGGATCGCATCCTGATATAATTCATTGCCATGATTGGTCGAGCGCTCCAGTGGCATGGCTGTACAAAGAGCACTATGGGCAGTATGGACTTAGTAATGCAAGGATTGTCTTCACTATTCATAATCTTGAGTTTGGGGCATATTTCATTGGAAGAGCAATGGCTTACGCAGACAAGGCTACAACTGTCTCTGATACCTATTCAAAGGAGGTTGCTGGAAATCCTGCAATTGCCCCACACCTTTACAAGTTTCATGGTATACTGAATGGGATAGATCCAGATATATGGGATCCTTACAACGATAAGTTCATTCCGGTACCGTATACATCAGAAGATGTTGTTGAAGGCAAAAAGGCAGCCAAGGAAGCATTGCAGCAAAGACTTAGCATTAGGAAAGCTGATGTCCCTTTGGTGGGGATAATTTCTCGATTAACTCATCAGAAAGGAATCCATCTCATCAAGCATGCCATTTGGCGTACTTTAGAGCGCGGTGGACAGGTTGTATTATTGGGTTCTGCTCCAGATCCGCGTATACAGAATGATTTCGTTAATCTCTCGAATCAAATGCATAATTTGCATAGTGATCGTGCTCGCCTTGTTTTGACCTACGATGAACCTCTTTCACACCTGATATATGCAGGTGCAGATTTCATCCTTGTGCCTTCTATATTTGAGCCATGTGGCCTAACTCAGCTTGTTGCTATGAGATATGGATCGATACCTGTTGTTCGTAAAACAGGAGGTCTGTATGATACCGTATTTGATGTTGATCATGATCAAGAGAGAGCAAAGGCACATGGCCTCGAACCTAATGGATTCAATTTTGAAGGAGCTGATACTGCTGGCGTGGATTATGCTCTGAATAGGGCAATATCAGCCTGGTATGATGGAAAGCAATGGTTGAACTCACTGCGCAAGCTTGTGATGGAGCAGGACTGGTCTTGGAATCGGCCAGCGCTTGAATACATGGAGCTATATCACGCAGCACGCAAGTACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_70657.p1 GENE.S_Transcript_70657~~S_Transcript_70657.p1 ORF type:complete len:1309 (+),score=333.72,CBM53|PF16760.1|8.3e-25,CBM53|PF16760.1|2.6e-25,CBM53|PF16760.1|7e-25,Glyco_transf_5|PF08323.7|9e+03,Glyco_transf_5|PF08323.7|1.9e-46,Glycos_transf_1|PF00534.16|1e-06,Glyco_trans_4_4|PF13579.2|4.6e-06 S_Transcript_70657:348-4274(+)
MEVTLQAQRPFLCRQSHKQNAHLNFRPYIGLFSHRTSTKYSQSYSWHVEYSANGIFRPFSATGDFSRRRQKRWSTPRSKGPAPKGFVPKSPVGTGSQKKEKRNTEDNKTSATPAPKPDTGTSGIETSGADDRGVSEASQANRNEQHQAGGTNGKVGDLSPANEAVAISTNLLKEVESVRGFIGKGKSTADVDVVEEGSSSTTENYEIIETEDNVTDHDMVESDMKGSATIISDEKDDDDLEHITQNPTPANYQSIEADNYGAEVLDSEPRRFDITAVEKEVKDLVNTIQENLAVVNYHSIVSNKDFSENEVLATESLDADIGDEREAKEAVSLQENVDLVSLQENVDLVNIESMKSEDVAETNVLGSETMDNITSDVKALEDSLRKLELEKAALEHKQVLEKLAEENFSKGNKIFIYPGTARSDGDIEVFLNRSISSLKNEPDVLVMGAFNDWRWKSFTTKLEKTHLRGDWWSCQIHVPREAYKLDFVFFNGKDVYDNNDKKDFHISVEGGMDVATFEDFLLEEKRRELEDLARQQAERERLAEEQRRREEEKAAAEADRAQARIEVEKKREKLSMLMNKALPFLENVWFFEPRVFEGGDLVRLYYKRSSGPLAQSNDLWIHGGHNGWEGGLSIVARLVKSEEKDGDWWYAEVTITDQAFVLDWVFADGPPQNASRYDNNKSQDFHAVVPKSMYDELYWVEKEQRIYQRLQEERRAHEEAIRAKADKTARMKAETKEQTLKTFLLSQRHIVYTDPVDVQAGRDVTVYYNPSNTVLNGKPEVWFRCSFNRWTHRRGPLSPQKMLPAENTSHVSTTVKVPLDAYMMDFVFSEREDGGIFDNKNGMDYHVPVFGGIAKEPPTHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLNHHVDIIFPKYDCLNLSHVKDLHYERSYSWGGTEIKVWFGKVEGLSVYFLEPQNGLFWTGCVYAGRNDGERFGFFCHAALEFLLQSGSHPDIIHCHDWSSAPVAWLYKEHYGQYGLSNARIVFTIHNLEFGAYFIGRAMAYADKATTVSDTYSKEVAGNPAIAPHLYKFHGILNGIDPDIWDPYNDKFIPVPYTSEDVVEGKKAAKEALQQRLSIRKADVPLVGIISRLTHQKGIHLIKHAIWRTLERGGQVVLLGSAPDPRIQNDFVNLSNQMHNLHSDRARLVLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDQERAKAHGLEPNGFNFEGADTAGVDYALNRAISAWYDGKQWLNSLRKLVMEQDWSWNRPALEYMELYHAARKY*

Click here to download the sequence:
Link to NCBI Protein BLAST