Transcript Information: S_Transcript_70692.p1


Annotated TAIR IDAT3G54890.1
Annotated Gene Namephotosystem I light harvesting complex gene 1
Annotated Gene Symbol(s)LHCA1
Annotation TypeOrtholog
Chromosome Positionchr3:20339706-20340922 | Reverse length=241
E-Value6.9E-155
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11236.8042152981
Replicate 21346.0088090777
Replicate 31639.1635030092
Condition 2: 8 Hour
Replicate 11267.0044651981
Replicate 21289.415535365
Replicate 31294.9161672581
Condition 3: 24 Hour
Replicate 11308.747311311
Replicate 21360.470988836
Replicate 31341.1592356955


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_70692.p1 GENE.S_Transcript_70692~~S_Transcript_70692.p1 ORF type:complete len:247 (+),score=43.45,Chloroa_b-bind|PF00504.17|1.4e-45 S_Transcript_70692:340-1080(+)
ATGGCTTCCAATGCCTTAATGAGCTGTGGCATCAATGCTGCGGTTTTTTCCTCTTCTCTCTCCTCCTCGAAATCGAAATTCGCGGCCTCTGTGCCTTTGGCAAATGTATCATGCAAAGCATCATCTAGGTTCACCATGTCTGCAGAGTGGATGCCTGGCGAGCCTAGACCACCTTACCTTGATGGATCAGCTCCCGGTGATTTTGGGTTCGACCCACTTCGGCTAGGGGAAGTACCCGAGAATCTGGAGAGGTTCAAGGAGTCTGAGCTCATCCATTGCAGATGGGCAATGCTTGCTGTTCCAGGGATCTTAGTACCTGAGGCCTTGGGATTAGGCAATTGGGTGAAAGCTCAAGAATGGGCAGCACTGCCAGGAGGTCAAGCCACATACTTGGGGAACCCAGTGCCATGGGGAAACCTGCCGACGATTTTGGTTATAGAGTTCCTTTCCATCGCCTTCGTAGAGCACCAACGGAGCATGGAGAAAGACCCTGAAAAGAAGAAGTACCCTGGTGGAGCTTTCGACCCTTTGGGTTACTCTAAGGACCCTAAGAAATTCCACGAATTGAAAGTCAAGGAAATCAAGAATGGCCGTCTTGCATTGCTTGCTTTTGTGGGTTTCTGCGTTCAACAATCGGCATATCCGGGAACAGGCCCTCTAGAAAACTTGGCAACTCACTTGGCTGACCCATGGCACAACAACATCGGGGACATTCTTATTCCCAGATCAATTTCACCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_70692.p1 GENE.S_Transcript_70692~~S_Transcript_70692.p1 ORF type:complete len:247 (+),score=43.45,Chloroa_b-bind|PF00504.17|1.4e-45 S_Transcript_70692:340-1080(+)
MASNALMSCGINAAVFSSSLSSSKSKFAASVPLANVSCKASSRFTMSAEWMPGEPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAALPGGQATYLGNPVPWGNLPTILVIEFLSIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPKKFHELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDILIPRSISP*

Click here to download the sequence:
Link to NCBI Protein BLAST