Transcript Information: S_Transcript_70700.p1


Annotated TAIR IDAT2G30950.1
Annotated Gene NameFtsH extracellular protease family
Annotated Gene Symbol(s)VAR2, FTSH2
Annotation TypeOrtholog
Chromosome Positionchr2:13174692-13177064 | Forward length=695
E-Value3.1E-229
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.18874468961121
Replicate 20.62589473922028
Replicate 30.1743993955896
Condition 2: 8 Hour
Replicate 10.40331707455571
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 11.1361405125132
Replicate 20.64294500925808
Replicate 30.47701266014404


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_70700.p1 GENE.S_Transcript_70700~~S_Transcript_70700.p1 ORF type:complete len:423 (+),score=112.01,AAA|PF00004.25|4.5e+03,AAA|PF00004.25|1.4e-45,TIP49|PF06068.9|1.3e-05,FtsH_ext|PF06480.11|1.8e-05 S_Transcript_70700:216-1484(+)
ATGGCTACCTCATCACCATGCCTTGTTGGACATGGGTCATCGACCTGCAGCACCAAAACTATTTCAAATGAGAAACTTTTTCTTAGGCACCAATCTGCAGCTCCAGCAAGGATACTGTCGCCAAGGTATCAAAAGGCATTTATTATCAAAGCATCTATGGACCGGGCACAAAATCAAGGAAGAAGAGATGTCTTAAAATTGCTGCTTGGCAATGTGGGACTTGCATCTACATTAATGGGTGGCAGAAATGCTTATGCTGATGATCAAGGAGTATCTTCTTCAAGGATGTCTTACTCAAGGTTTCTGGAGTATCTAGATAAGGACAGGGTGAAAAAGGTAGATTTATTTGAAAATGGAACCATAGCTATTGTGGAGGCGATCTCTCCTGAGTTAGGTAACCGTGTGCAACGGGTTCGTGTTCAACTTCCAGGACTCAGCCAGGAGCTTCTGCAGAAGCTCAGGGAAAAGAACATTGACTTTGCAGCACACAATGCGCAAGAGGATTCTGGTTCGCTGCTGTTTAACTTGATAGGAAATCTTGCTTTTCCTCTAATCCTAATTGGAGGACTTTTCCTTCTTTCAAGACGCACTTCTGGAGGAATGGGTGGTCCTGGTGGCCCTGGCTTTCCCCTAGCTTTTGGCCAATCAAAAGCCAAGTTTCAGATGGAGCCTAATACTGGTGTGACCTTTGATGATGTTGCTGGTGTTGATGAAGCAAAGCAGGATTTCATGGAAGTGGTTGAGTTTCTGAAAAAACCAGAGAGGTTCACTGCTGTTGGGGCTCGTATACCCAAAGGTGTTCTTCTTGTTGGCCCTCCAGGTACCGGAAAGACGTTGCTGGCTAAGGCTATTGCTGGGGAAGCTGGTGTTCCATTTTTCTCAATTTCTGGTTCAGAGTTTGTTGAGATGTTTGTTGGTGTGGGTGCGTCTCGAGTGCGTGATCTTTTCAAAAAGGCAAAGGAAAATGCACCTTGCATTGTCTTTGTTGATGAAATTGATGCAGTGGGTAGGCAAAGAGGAACTGGAATTGGTGGAGGGAACGACGAAAGAGAACAGACCTTGAATCAGCTTCTGACTGAGATGGATGGCTTTGAGGGAAACACTGGCATTATTGTAGTAGCAGCGACTAACAGAGCTGACATTCTTGACTCGGCCTTGCTGAGGCCAGGACGCTTTGACAGACAGGTGGGCTTTTCTTACCAAGCAGCAGTACTTAATTATCCATGTTCTGGTTGTTGTCTTGTGGAATCAACATTCGACCTAATCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_70700.p1 GENE.S_Transcript_70700~~S_Transcript_70700.p1 ORF type:complete len:423 (+),score=112.01,AAA|PF00004.25|4.5e+03,AAA|PF00004.25|1.4e-45,TIP49|PF06068.9|1.3e-05,FtsH_ext|PF06480.11|1.8e-05 S_Transcript_70700:216-1484(+)
MATSSPCLVGHGSSTCSTKTISNEKLFLRHQSAAPARILSPRYQKAFIIKASMDRAQNQGRRDVLKLLLGNVGLASTLMGGRNAYADDQGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKLREKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRTSGGMGGPGGPGFPLAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVGFSYQAAVLNYPCSGCCLVESTFDLI*

Click here to download the sequence:
Link to NCBI Protein BLAST