Transcript Information: S_Transcript_70784.p1


Annotated TAIR IDAT5G15270.2
Annotated Gene NameRNA-binding KH domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:4958738-4960947 | Forward length=548
E-Value5E-75
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 127.666595125723
Replicate 229.729770679408
Replicate 328.0697361507
Condition 2: 8 Hour
Replicate 129.392766712764
Replicate 229.129327847621
Replicate 326.504162417924
Condition 3: 24 Hour
Replicate 127.738517746121
Replicate 226.551884823316
Replicate 324.519377478874


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_70784.p1 GENE.S_Transcript_70784~~S_Transcript_70784.p1 ORF type:complete len:682 (+),score=139.60,KH_1|PF00013.25|2.7e-14,KH_1|PF00013.25|5.4e-13,KH_1|PF00013.25|8.8e-11,KH_1|PF00013.25|8.4e-12,KH_3|PF13014.2|4.8e-10,KH_3|PF13014.2|4.8e-09,KH_3|PF13014.2|5.9e-10,KH_3|PF13014.2|1.2e-07,KH_2|PF07650.13|0.14,KH_2|PF07650.13|0.3,KH_2|PF07650.13|0.00077,KH_2|PF07650.13|0.048,KH_4|PF13083.2|0.59,KH_4|PF13083.2|37,KH_4|PF13083.2|11,KH_4|PF13083.2|19 S_Transcript_70784:291-2336(+)
ATGGAGGGAGGCAGAAGGGATGCTCTCAAAAGGAGGTCAAATACCCAGTTTAAGAAAAAGGGATTGAGTAAGAGGGGTAGATGGGGTAATTTCGGCCCAGAACATCACGAAAACCCTCAGGTTCCTAACCCCTCTGACACTGTATACCGAATACTTTGCCCGTCAAGGAAGATCGGTAGTGTTATTGGAAAAGGTGGAGGCATAATCAAAAACTTGAGAGAAGACACTAGGGCAAAGATTACTGTTTCTGACTCGATTCCAGGCTCAGATGAGCGTGTGATAATGATCTACAGCCCTCCAGATAAAAACCCGAGGAAAGATTCAGATAAGGGGAATGAAGAGGAGTCTATGCTACTGCATTGTCCGGCACAAGAGGCTCTCTTGAAAGTTCATGACAGGATAATTGAGGAAGATTTGTCTGGAAGACCGGAAGATGATGATAATAACGTTGTAGTCACTGCTCGTCTTCTGGTTCCTAACAATATGGTAGGATGTCTTCTTGGGAAAGGTGGGGATGTTATTCAGAGATTGAGGAGTGAGACTGGTGCAAGCATTCGCGTACTTCCGTCAGAGCATCTGCCAACTTGTGCCCTGAGTACTGATGAACTTGTGCAGCTACAAGGAAAACCAATGGTTCTCAAGAAAGCACTCTATGAAGTTTCCACATTGCTGCATCAGAATCCACGCAAGGAGAAAGCTTTAAATTTTGCCCTGCCTTTCCGAGGACCAGGGTTTCAACCTGCTGGTCCTCCTCTAACCAATATGCCACCACCTCACAATCCAATGTGGTCTCCACGTAGTCTTTCTCCGCGCATGCCACCTCCACCTTGGATGGATGACTATAGAAGCCATCCTGGACTTGCGCCAGGTGGATATGATGACGATATTGCCAGACCCGGTCTTGAACCTTCGGGTGAGTTTTCCATCAAAGTTTTGTGCTCAGCCAGCAGGATTGGTGGAGTAATTGGCAAAGGAGGAATCAACGTGAGACAGTTACAACAGGAGACTGGCACAAGCATCCATGTTGAAGATGCATCAGCCTCATCAGAGGAACGTATTATTCGAGTTTCAGCTTTTGAGACGTTGCGAAACCCAAGGTCACAGACTATTGATGCAATTCTTCTGCTTCAAAATAAAGTGAGTGAGGTGTCAGAGAAGGGTATCATTACTACAAGACTTCTTGTTTCCTCTAGTAAGGTTGGATGCCTCCTTGGTCAAGGAGGTTCAATTATCAATGAGATGAGAAGGAGAACTCAGGCAGATATACGCGTTTACTCTAAGGATGAGAAACCTGAGTGTGCTTCAGAAGATGAAGAGCTTGTGCAGGTATCTGGTAGTTTTGTGGTAGCCAAAGATGCTTTGGCAGAAATAGCATCAAGACTAAGGGCAAGATGCTTGAGGGATGCTAATGCTGGAGCGGAACCAGTTCCATTGAGGCCAGTCCAAGGATATGGTCCCAGTGGAAGCTTCCCTCGTGGAGAACCTCCTGTGCCTGGTCCAGTTGGAGTTGGTGCTCCTGATCGTTATGGTACTGTTAAGGGTGGTATGCATGACTATGAACCTCCTAGCTATCCAGTTCATCCAAGTGCCTCTAGATATCCAAATCCTAATAACTCTGTTGAGGTTCGTTACCCGAATCCTGCAGTCAGTCCTCTTCCAGGAGGCATGTATTCAAACTCGCTGGAGGCTCCTGTAACGAGGATGAAACTCCAAGATCCTTACCTTGGTCGCTCAGAAACTATGCTTGATGGACGTGGTGGCTCTGATCACTACAATGCTGCACCAGCTATGCACCATAATTTAGCTGGGAATAATCCCCACCATGGTTATCCAAATCCAAATAGTCAAGGCTCATACCACAACATGAATGGACAAGGCTCGTACCACAGCTTGAGTGCACAGCAAGCATCGTACCAAAGTCCTTATCAGAACGCTCAACAAATTCCTTACCAACAGAACAGCGCCCAACAGAGCCCCTACGGCAACATGAATGCTCAGCATAGTGCCTACCAGAACGTCACAGCACACAGTGCCTACCAATACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_70784.p1 GENE.S_Transcript_70784~~S_Transcript_70784.p1 ORF type:complete len:682 (+),score=139.60,KH_1|PF00013.25|2.7e-14,KH_1|PF00013.25|5.4e-13,KH_1|PF00013.25|8.8e-11,KH_1|PF00013.25|8.4e-12,KH_3|PF13014.2|4.8e-10,KH_3|PF13014.2|4.8e-09,KH_3|PF13014.2|5.9e-10,KH_3|PF13014.2|1.2e-07,KH_2|PF07650.13|0.14,KH_2|PF07650.13|0.3,KH_2|PF07650.13|0.00077,KH_2|PF07650.13|0.048,KH_4|PF13083.2|0.59,KH_4|PF13083.2|37,KH_4|PF13083.2|11,KH_4|PF13083.2|19 S_Transcript_70784:291-2336(+)
MEGGRRDALKRRSNTQFKKKGLSKRGRWGNFGPEHHENPQVPNPSDTVYRILCPSRKIGSVIGKGGGIIKNLREDTRAKITVSDSIPGSDERVIMIYSPPDKNPRKDSDKGNEEESMLLHCPAQEALLKVHDRIIEEDLSGRPEDDDNNVVVTARLLVPNNMVGCLLGKGGDVIQRLRSETGASIRVLPSEHLPTCALSTDELVQLQGKPMVLKKALYEVSTLLHQNPRKEKALNFALPFRGPGFQPAGPPLTNMPPPHNPMWSPRSLSPRMPPPPWMDDYRSHPGLAPGGYDDDIARPGLEPSGEFSIKVLCSASRIGGVIGKGGINVRQLQQETGTSIHVEDASASSEERIIRVSAFETLRNPRSQTIDAILLLQNKVSEVSEKGIITTRLLVSSSKVGCLLGQGGSIINEMRRRTQADIRVYSKDEKPECASEDEELVQVSGSFVVAKDALAEIASRLRARCLRDANAGAEPVPLRPVQGYGPSGSFPRGEPPVPGPVGVGAPDRYGTVKGGMHDYEPPSYPVHPSASRYPNPNNSVEVRYPNPAVSPLPGGMYSNSLEAPVTRMKLQDPYLGRSETMLDGRGGSDHYNAAPAMHHNLAGNNPHHGYPNPNSQGSYHNMNGQGSYHSLSAQQASYQSPYQNAQQIPYQQNSAQQSPYGNMNAQHSAYQNVTAHSAYQY*

Click here to download the sequence:
Link to NCBI Protein BLAST