Transcript Information: S_Transcript_70947.p1


Annotated TAIR IDAT4G38130.1
Annotated Gene Namehistone deacetylase 1
Annotated Gene Symbol(s)HD1, ATHD1, HDA1, RPD3A, HDA19, ATHDA19
Annotation TypeOrtholog
Chromosome Positionchr4:17896493-17899057 | Reverse length=501
E-Value6.3e-314
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 137.706196138823
Replicate 235.592275739077
Replicate 334.48311175551
Condition 2: 8 Hour
Replicate 136.924122713433
Replicate 232.952522545489
Replicate 334.515440610872
Condition 3: 24 Hour
Replicate 135.372075872545
Replicate 230.839134389459
Replicate 335.33108023883


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_70947.p1 GENE.S_Transcript_70947~~S_Transcript_70947.p1 ORF type:complete len:499 (+),score=114.32,Hist_deacetyl|PF00850.15|1e-81 S_Transcript_70947:198-1694(+)
ATGGATACTGGAGGTAATTCACTTCCATCAGGACCAGATGGGGTGAAGAGAAAGGTTTCATATTTCTATGACCCAGAAGTTGGAAACTATTACTATGGGCAAGGTCACCCTATGAAGCCACATCGCATTCGGATGACACATGCTCTTCTTGCTCACTATGGGCTGCTTCAACATATGCAAGTGCTGAAGCCTGTACCCGCCAGAGATAGAGATCTTTGCAGATTCCATGCTGATGATTATGTTTCCTTCCTGAGGGGTATTACACCGGAAGCACAACAGGACCAGTTAAGGCAATTGAAGCGGTTCAATGTCGGTGAAGATTGCCCTGTATTTGATGGTCTTTATTCTTTTTGCCAAACATATGCCGGAGGTTCTGTCGGTGGCGCTGTGAAGCTGAATCATGGACTTTGTGACATTGCTATTAACTGGGCTGGCGGTTTGCATCATGCAAAAAAGAGCGAGGCTTCTGGTTTCTGCTATGTGAACGATATTGTACTGGCGATTTTGGAACTTCTTAAAGTGCACGAGCGTGTTCTGTATGTGGACATCGATATCCACCACGGGGATGGTGTGGAAGAGGCCTTTTACACTACAGATAGGGTCATGACAGTTTCTTTTCACAAGTTTGGAGATTATTTTCCTGGCACAGGAGACATCCGTGATATTGGATATGGAAAGGGAAAATATTATTCTCTCAATGTGCCCTTGGATGATGGCATTGATGACGAGAGTTACCAGTCATTGTTTAAGCCAATTATGGGAAAAGTAATGGAGTTTTTTAAGCCTGGAGCTGTTGTCTTGCAATGTGGTGCTGATTCGTTGTCAGGCGATAGATTAGGCTGTTTTAACCTCTCCATCAGAGGTCATGCAGAGTGTGTCAAATACATGAGATCCTTCAATGTCCCGTTGCTGTTGGTGGGTGGAGGTGGCTATACTATACGAAATGTAGCTCGTTGCTGGTGCTATGAGACTGGGGTCGCACTTGGGATTGAACTTGATGATAAGATGCCGCAGCATGAGTACTATGAGTACTTTGGTCCTGACTATACTCTGCACGTTGCTCCAAGTAACATGGAAAATAAGAACTCACGACCGATGTTGGAGGATATTAGAGCGAAGCTTCTTGACAACCTCTCTAGGTTACAGCATGCACCAAGTGTGCAGTTCCAGGAGCGCCCACCTGAAGCTGAGGTCCCAGAGGAAGATGAAGATCAGCAGGATCCAGATGAAAGATGGGATCCAGATTCTGATATGGAGGTTGATGATCGTATTACTCTTCGAAGCAGGGTGAAGCGAGAGATTATGGAGACAGACCTTAAAGATCCGGAGGATATTAAGGAAGCTGTTGATCATGCAAACATGGATGTCTCATATGGTCCTGGAAACACGTCCGTGAAGGCTCCAAGCATGGGTCCAGATCAGCCAGAAGTTTGTATTAAAATGGAGCAAGACAACTCAAACAAGCCACCTGATCAAGCAGCTGACATGAATTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_70947.p1 GENE.S_Transcript_70947~~S_Transcript_70947.p1 ORF type:complete len:499 (+),score=114.32,Hist_deacetyl|PF00850.15|1e-81 S_Transcript_70947:198-1694(+)
MDTGGNSLPSGPDGVKRKVSYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQVLKPVPARDRDLCRFHADDYVSFLRGITPEAQQDQLRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKVHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYGKGKYYSLNVPLDDGIDDESYQSLFKPIMGKVMEFFKPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVKYMRSFNVPLLLVGGGGYTIRNVARCWCYETGVALGIELDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRPMLEDIRAKLLDNLSRLQHAPSVQFQERPPEAEVPEEDEDQQDPDERWDPDSDMEVDDRITLRSRVKREIMETDLKDPEDIKEAVDHANMDVSYGPGNTSVKAPSMGPDQPEVCIKMEQDNSNKPPDQAADMNS*

Click here to download the sequence:
Link to NCBI Protein BLAST