Transcript Information: S_Transcript_71172.p1


Annotated TAIR IDAT3G61790.1
Annotated Gene NameProtein with RING/U-box and TRAF-like domains
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:22871974-22873543 | Reverse length=326
E-Value7.2E-202
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 135.269133124824
Replicate 225.803539344083
Replicate 324.824305662701
Condition 2: 8 Hour
Replicate 136.37860701158
Replicate 238.860442965892
Replicate 341.451579079583
Condition 3: 24 Hour
Replicate 130.083957194659
Replicate 227.839630137036
Replicate 330.982096068568


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_71172.p1 GENE.S_Transcript_71172~~S_Transcript_71172.p1 ORF type:5prime_partial len:289 (+),score=41.26,Sina|PF03145.12|1.6e+04,Sina|PF03145.12|4.9e-76 S_Transcript_71172:3-869(+)
AATATCAATATTAATGGGGGGATTGTCAATTCCTCATCTATTCATCCATCTACTGGGGTCCATGAGCTTCTTGAATGCCCTGTTTGTACCAATTCTATGTACCCTCCTATTCATCAGTGTCGTAACGGACATACACTTTGCTCAACCTGTAAAACACGTGTGCAAAACCGATGTCCAACTTGCAGACAAGAACTTGGAGATATACGATGTCTAGCATTGGAAAAAGTTGCTGAATCACTTGAGCTTCCTTGCAAATACTATTCTCTTGGTTGTCCAGAGATATTCCCCTACTACAGCAAATTAAAGCATGAGGCCATATGTAACTTCAGGCCTTACAATTGTCCGTATGCTGGATCAGAGTGTTCTGTCACCGGGGATATCCCATACCTCGTGACTCATTTGAGGGATGAGCACAAGGTTGACATGCATTCCGGATGCACATTCAACCATCGTTATGTGAAGTCTAACCCACGTGAGGTGGAAAATGCTACTTGGATGCTAACTGTGTTCCACTGTTTTGGCCAGTATTTCTGCCTCCATTTTGAAGCTTTCCAGCTTGGTATGGCCCCTGTATATATGGCGTTTCTTCGGTTTATGGGTGATGAGATGGAGGCTAGGAATTATAGCTACAGCCTTGAAGTTGGGGGTTATGGCCGGAAAATAATTTGGGAGGGAACACCTCGAAGCATTAGAGACAGCCACAGAAAGGTGAGGGACAGCCATGATGGTCTCATCATACAGCGCAACATGGCGCTTTTTTTCTCTGGAGGGGACCGAAAAGAACTGAAGTTGCGGGTTACAGGGCGTATATGGAAGGAGCAACAGAATCCTGATGGTGGAGCTTGCATTCCCAATCTCTGCAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_71172.p1 GENE.S_Transcript_71172~~S_Transcript_71172.p1 ORF type:5prime_partial len:289 (+),score=41.26,Sina|PF03145.12|1.6e+04,Sina|PF03145.12|4.9e-76 S_Transcript_71172:3-869(+)
NININGGIVNSSSIHPSTGVHELLECPVCTNSMYPPIHQCRNGHTLCSTCKTRVQNRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGCPEIFPYYSKLKHEAICNFRPYNCPYAGSECSVTGDIPYLVTHLRDEHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEMEARNYSYSLEVGGYGRKIIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQQNPDGGACIPNLCS*

Click here to download the sequence:
Link to NCBI Protein BLAST