Transcript Information: S_Transcript_71248.p1


Annotated TAIR IDAT1G18910.1
Annotated Gene Namezinc ion binding;zinc ion binding
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:6532706-6537993 | Reverse length=1254
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.7929356081036
Replicate 210.360685976209
Replicate 310.932853950358
Condition 2: 8 Hour
Replicate 112.761113565772
Replicate 213.333621789277
Replicate 312.363191610889
Condition 3: 24 Hour
Replicate 110.87001402492
Replicate 210.062732339898
Replicate 39.2615347055586


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_71248.p1 GENE.S_Transcript_71248~~S_Transcript_71248.p1 ORF type:complete len:1250 (+),score=215.85,zinc_ribbon_6|PF14599.2|2e+03,zinc_ribbon_6|PF14599.2|1.6e+04,zinc_ribbon_6|PF14599.2|1.6e+04,zinc_ribbon_6|PF14599.2|1.9e-25,zf-CHY|PF05495.8|2.4e-18,zf-CHY|PF05495.8|2.2e+03,zf-CHY|PF05495.8|3.5e+02,Hemerythrin|PF01814.19|0.00057,Hemerythrin|PF01814.19|3.5e+02,Hemerythrin|PF01814.19|9.4e+02,Hemerythrin|PF01814.19|5.7e-07,Hemerythrin|PF01814.19|0.17,Hemerythrin|PF01814.19|5.3e+03,zf-RING_2|PF13639.2|3.7e+03,zf-RING_2|PF13639.2|1.6e+04,zf-RING_2|PF13639.2|1.6e+04,zf-RING_2|PF13639.2|1.1e-06,zf-RING_2|PF13639.2|2.3e+02 S_Transcript_71248:177-3926(+)
ATGGGAGGCGACCAATCCCTATCTGAATGCTCTTCTTCTACTCCGACTAGCTCGTCGGCTCCAATGCCGGAATATTCCTTCTCTGGCACCGGAGCTCCGATTCTCTTTCTGGTGTTGCTCCACAAGGCGTTCGGAGCTGAGCTCTACGCGCTTAAGCGCGTGGCTATGGACGCCGGCGAGCGTGGAGAAGTTGAGCAGCGAAAGGCGGTGGTTGAGCTTCAAAATAGGCTTGACTTCTTGAGAAGCGTTTATTCTTATCATTGTGCTGCTGAAGATGAGGTTATTTTTTTTGCTTTGGATGGTCGAATGAAAAACATTGTGTGTACATATGGCCTAGAACACAATAGCATAGATAGTTCGTTTGCTTTTGTCTTTTCTTATCTGGACTGTTTGTCCAGTGACAGAGGATTTGCACATCAGGAATTCCAAGAACTTATATTTCGTATCAGTGCTCTACATGACTCGATTTGCCAGCACATGTTAAAAGAAGAACAACAGATTTTCCCTGAGTTGCTGAGGCAATTCTCTGATGAAGAGCAAGCATCACTAGTTTGGCAATACATGTGTAGTGTCCCTGTTATGCTCATGGAGGACCTGTTTCCATGGATGAAGTGTTTTCTCTCACCAGAAGAACAATTGGATCTGAAGCATTGTATGAATAAAATTGTGCCACAAGATAAAACATTGCATGAGGTGATAATGTCCTGGCTTGATAAGACTACTCGACAGCACCCACTGCTAGGAGGTTGTTTTGCGTGTGACAATCCCTCTTGCTTTCTTGATGAATTAGATAATTTGAAAAATGAATCTGAGCTGCACTTGCCCATGAGCTCTTCTGGTAAAAGCTGTTCGTGGGATTTGGACATGCAGATAGATGTCAAGGACAGTCCATTTAATGGACTTTTTCTTTGGCATGCTGCCATCAGGTCTGAGTTGAAAGAAACTTTAGACAAGCTCTATCAAATAAGGTCAGAGAAATTCTCAAATGTGGCGTCAGTAATTGTTCGAATCAACTTTCTTATTGATGTGTTGATATTTTATAGTAATGCATTGGAAAAGGTCTTTTATCCTTTGATGAAAGAGAACTTTGTGCTTCAACTGTCATCCCTTTGCAAATCATTTCCTACCAAAGCTGAAGTCGAAGAACTTCAGAAGATCCTATATGATGCTGATCAGATTAGTGTGGCTAATCCCGTTTTGGTGGGGTTGCTATGTAATAAGGTGGAGGCTCTGATATTGGAAACTACCAAACACATGTCTTTCCAAGAAACAGAGGTTTTCCCCCTCATTAGCAAGACATGCAACCACGACAGTCAACAGAAATTACTAGTCCGAAGCCTTCGTATGCTGCCCCTTGGGTTGTTAAAATGTGTGGCTATTTGGTTTTCATCTCGATTGCCTAAGGACAAACTAAGGCCTATTCTCCATGTCATCGAGCACTCTGGCTTTCTAAATAAATCTTTTGGCTCCCTTCTACATGAATGGATCCGCACTGGTTATTCTGGCAAAACTACTATGGAAGACCTACATGAGATGTTCAACAGCAGAATGGCTTATGTATCTGAGCAGATTAAGGAGGGTAAAGATGCCTGCCAAAAATCCAAGCACGTGATGATTAGACACTGTTCTGTTGACAGCTCTAGAAGCTTTCATTCAGATTCTTTAAGCAAGTGTCTCCAGCCAACTGAGAAGCATGGCACGTTGTATTCAAGTGGAATTAATTCACTCATTTTTTCTTCAAGAGTATCAAATCCACTTCACTCCTTTTCTGAAAGTCCAACTGAAGTAGTTCCCATTAACTACCCAGAAGCGAAGCCAATGGACCACATCTATTATTTTCACAAAGCTCTAAAGAAAGACCTTGAGTCCTTGCTCCATGATGCAGCAAAGCTATCAGAAAACATGGGGCTGCTTCTGGAGTTCAGCCGACACTTCCAGCTTGTGCGATCCTTATATGAACTCCATAGTGAAACAGAGGATGAGATAGCATTTCCAGCATTGGAGGCAAAAGGAAAAGTGCAAAACCTAACACAAAGTTATGCTATTGACCACAAGCTGGAAGCTGAGTGCTTTGCTAGAGTATCAAGAATTATTGATAAACTGTTTGAATTAAATAATCAAGTTTCTAGTGCAGAAGTTGATCCAGGAGATCCAGCATTGATGAAATATCAGAAATTATGTTTTGAGCTCCAAAATAGCTGCAAGTCATTGGAAAATTTACTGAAAAGTCATATCCATCGTGAAGAGGTTCAACTTTGGCCCTTGTTTAGAGAGTGTTTCTCCATAGAGGAACAAGAGACAATTATTGGACACATGCTTGGAAGAACAAATGCAGGACTTCTACAAGAAATGGTGAAATGGTTCCAGGCCTCGTTAACATCAGAGGAGCAGCATGCTATGATAAATTTCTGGCGCAAAGCTGCAAAATATACAAAGTTTGATGAATGGTTAGGAGAGTGGTGGGAAGGTATGAAAAGCTACGAGTTTACCAGGGCTGGTGACACAAATATTTCTCGTTCATCAGCAATGGACTCCCTGGACATTATCTCAAAGTATATATCTACGAGTGTCATTCATGACCAAGGGGGGGAAATCAATGATAAAATTGTGAAGTTAACTGATAATGATTCCAAGGCTAAAAACATAGATAAGAAGATGGAAGGTCTTGATATGGACAACCAGAAGCACAAATCGTCTGAGTATACAAAGCTCTTCGATGAAAAGGAGGAGAAGCATAGGAGGGAAGAAAAGCTCATGGATTTAGTCAATGAACACAGTCAACTTTCTAATCATGTCATACAATATCAAAACAAACCCTTGGTGATGAGTCAGGTGGAACTGGAGGCTGCAATTAAAAGGGTTTCACAGGACTCCTCTTTGGATCTGCAAGCAAAATCACGGATAATCCAACATTTGATGACTAGCAATTGGGCTGCAGCAAACCCACTGCTTGATTCAGATCAAATAATCACAAGAGAGCCTGGGAAACTTCCAGGTCAGTGTCCCTCATATAGAGATGTAGGAGGCACTGTATTTGGTTGCAAACACTACAAACAGAACTGCAAGCTCATGGCACCCTGTTGCAATCAACTGTTCACTTGTTGGCGCTGCCATGATGATGTTGCTGATCATCTCATGGATAGGAAAGCCATCACCCAGATGATGTGCATGAAATGCTTGGAAGTCCAACCAATTGGAAGCACATGTTCGTCTCCTTCCTGTCATAATTATTCTATGGCAAGATACTATTGCAAAATCTGCCGGTTGTTTGATGATGACAGGGAGATCTACCACTGCCCATATTGTAACATATGCCGTGTTGGAAAAGGTTTGGGGATTGATTATTTCCACTGCATGAAATGCAATGCGTGCATGTCAAGAACTCTTTCAGGGCATACATGCAGGGAGAAGTGCTTTGAGGATAAGTGTCCCATCTGCCATGAGGACATCTTTACTTCAAGCAATCCAATAAAGGCCCTCTCTTGTGGTCATATGATGCACTCAACATGCTTTCAGGATTACACATGCATGCAATATACCTGTCCAGTCTGCAGCAAATCACTTGGTAACATGCAGGTGTATTTCCAAATGTTGGATGCACTTTTGGCCGAGGAGAAGATGCCAGACGAGTACTGTGACCAGACTCAGGCCATATTATGCAATGATTGTGAGAAGAAAGGAACTGCTCCCTTCCACTGGTTGTATCACAAATGCCCATTTTGTGGCTCATACAACACTAGGCTTCTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_71248.p1 GENE.S_Transcript_71248~~S_Transcript_71248.p1 ORF type:complete len:1250 (+),score=215.85,zinc_ribbon_6|PF14599.2|2e+03,zinc_ribbon_6|PF14599.2|1.6e+04,zinc_ribbon_6|PF14599.2|1.6e+04,zinc_ribbon_6|PF14599.2|1.9e-25,zf-CHY|PF05495.8|2.4e-18,zf-CHY|PF05495.8|2.2e+03,zf-CHY|PF05495.8|3.5e+02,Hemerythrin|PF01814.19|0.00057,Hemerythrin|PF01814.19|3.5e+02,Hemerythrin|PF01814.19|9.4e+02,Hemerythrin|PF01814.19|5.7e-07,Hemerythrin|PF01814.19|0.17,Hemerythrin|PF01814.19|5.3e+03,zf-RING_2|PF13639.2|3.7e+03,zf-RING_2|PF13639.2|1.6e+04,zf-RING_2|PF13639.2|1.6e+04,zf-RING_2|PF13639.2|1.1e-06,zf-RING_2|PF13639.2|2.3e+02 S_Transcript_71248:177-3926(+)
MGGDQSLSECSSSTPTSSSAPMPEYSFSGTGAPILFLVLLHKAFGAELYALKRVAMDAGERGEVEQRKAVVELQNRLDFLRSVYSYHCAAEDEVIFFALDGRMKNIVCTYGLEHNSIDSSFAFVFSYLDCLSSDRGFAHQEFQELIFRISALHDSICQHMLKEEQQIFPELLRQFSDEEQASLVWQYMCSVPVMLMEDLFPWMKCFLSPEEQLDLKHCMNKIVPQDKTLHEVIMSWLDKTTRQHPLLGGCFACDNPSCFLDELDNLKNESELHLPMSSSGKSCSWDLDMQIDVKDSPFNGLFLWHAAIRSELKETLDKLYQIRSEKFSNVASVIVRINFLIDVLIFYSNALEKVFYPLMKENFVLQLSSLCKSFPTKAEVEELQKILYDADQISVANPVLVGLLCNKVEALILETTKHMSFQETEVFPLISKTCNHDSQQKLLVRSLRMLPLGLLKCVAIWFSSRLPKDKLRPILHVIEHSGFLNKSFGSLLHEWIRTGYSGKTTMEDLHEMFNSRMAYVSEQIKEGKDACQKSKHVMIRHCSVDSSRSFHSDSLSKCLQPTEKHGTLYSSGINSLIFSSRVSNPLHSFSESPTEVVPINYPEAKPMDHIYYFHKALKKDLESLLHDAAKLSENMGLLLEFSRHFQLVRSLYELHSETEDEIAFPALEAKGKVQNLTQSYAIDHKLEAECFARVSRIIDKLFELNNQVSSAEVDPGDPALMKYQKLCFELQNSCKSLENLLKSHIHREEVQLWPLFRECFSIEEQETIIGHMLGRTNAGLLQEMVKWFQASLTSEEQHAMINFWRKAAKYTKFDEWLGEWWEGMKSYEFTRAGDTNISRSSAMDSLDIISKYISTSVIHDQGGEINDKIVKLTDNDSKAKNIDKKMEGLDMDNQKHKSSEYTKLFDEKEEKHRREEKLMDLVNEHSQLSNHVIQYQNKPLVMSQVELEAAIKRVSQDSSLDLQAKSRIIQHLMTSNWAAANPLLDSDQIITREPGKLPGQCPSYRDVGGTVFGCKHYKQNCKLMAPCCNQLFTCWRCHDDVADHLMDRKAITQMMCMKCLEVQPIGSTCSSPSCHNYSMARYYCKICRLFDDDREIYHCPYCNICRVGKGLGIDYFHCMKCNACMSRTLSGHTCREKCFEDKCPICHEDIFTSSNPIKALSCGHMMHSTCFQDYTCMQYTCPVCSKSLGNMQVYFQMLDALLAEEKMPDEYCDQTQAILCNDCEKKGTAPFHWLYHKCPFCGSYNTRLL*

Click here to download the sequence:
Link to NCBI Protein BLAST