Transcript Information: S_Transcript_7128.p1


Annotated TAIR IDAT5G20610.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26160.1); Has 918 Blast hits to 759 proteins in 180 species: Archae - 6; Bacteria - 105; Metazoa - 264; Fungi - 89; Plants - 167; Viruses - 5; Other Eukaryotes - 282 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:6969184-6972794 | Forward length=1164
E-Value5.7e-320
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.915841184599
Replicate 211.854075067343
Replicate 312.425402700392
Condition 2: 8 Hour
Replicate 112.415714532093
Replicate 211.072169157288
Replicate 311.308237797219
Condition 3: 24 Hour
Replicate 114.310249947652
Replicate 211.600798467893
Replicate 311.756037646452


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_7128.p1 GENE.S_Transcript_7128~~S_Transcript_7128.p1 ORF type:complete len:1180 (+),score=358.89,NT-C2|PF10358.5|1.5e-17,NT-C2|PF10358.5|7.8e+03,LysM|PF01476.16|1.7e-08 S_Transcript_7128:374-3913(+)
ATGATGTCAAAATCTGAAGCTCGGAAGAAAAACAATGATGATTTAAATAATGGGAAGTTGTTAAATGAAATTGAAGCTATTAGCAAGGCCCTCTATTTGGACAAAAACCCATCCAAGAGTTCATCTTCTATAGCCAGGAATCGGCCTAAATCAGCTGATGGAGGCAATGCATTGTTACCCAATTCGAAGTCAAAGCGTGTTACTGATGATCCATCATTGAAGGATAAAAAGTCATTTTGGAATTGGAAACCACTAAAAGCTCTTTCCCAGGTCAGAAATCGAAGGTTCAATTGTTGTTTCACTTTGGAAGTCCACAAAATAGCAGGCTTGCCCACTAAATTCAGCGGCCTTAGCCTTTCTGTACATTGGAAGAGGAGGGATGGAGAAGTAGTGACGAGCCCAATCAAGGTGGTGGAGGGTGTAGCTGAATTTGAAGAGAAATTGATTCATACTTGTTCAGTTTATGGGAGTAGGAGTGGGCCGCATCACTCTGCCAAGTATGATGCAAAGCATTTCTTGCTATATGCAGCAGTACTTGGAAATCCTAAGCTGGATTTGGGAAAGCATCGCATTGATCTTACAAGGCTGCTTCCTCTTACATTGGAAGAGTTGGAGGACGAGAAGAGCTCTGGAACTTGGACAACAAGTTTTAAGCTCTCGGGTGAGGCTAAAGGTGCTGTTATGAATGTTAGTTTTGGATATGTAGTGTTAGGAGACAGCCTTGCTCCTAATGACAAGAGTGTGCCTCAACTTTTGGAGTCAAAATCGACTATTAAGAGTCGCATGAAAACAGATCAATATGATGGGAAGGGCTCAATCCGCCGTGTTGGAAGCCTTCCAACAAGTCAAAAACAATCTATGACATCTCGTTCTATAAATGACATAAAAATTCTTCGTGAGGTTGTCCCTATAAAAACATCTGAAATCTCTAATTCTGCAAATACGCTGCGTGAAAAGTTTGATGAGGAAAAGTCAGTGGTGGATGAAAAGTGTGAAACTGCAGTATTTCTGGATGATTCCAAGCCTCTAAAACCAGCTTCCTGCTCTCCATCAGATTCATCTAAGGGACACATAGTTGATGAGAATAACAAGTTTGAAATTACTGAGTCTCTAGATGATTCCAAGTCTCTAAAACCAGCTTCCAGCTTGTCGTCAGATTCATCTAAGGGATCGATAGTTGATGCAAATGGTAAGTGTGAAATTGATACCAAGCCTCTAAATCCAACTTCCAGTTTTCCATCAGATACATCTAAGGGGCACACAGTTGATGAGAGTGAAGATGCTGAATTTTCAGTTATTGAGAAAGGGATGGAGTCTTTCGGGGAAAAGCTTGGCTTGGATGAGGATAAGGCAAAGGATGCTGATGAGCTGATTATTAAGAGCCCTGATCTTCCTGTAGTTCACAGCAATGTGGAAGATGGTGCAGAAGATGGAGCTGATTTAAATAGAGAGAAAATTGTGTGCAGTAAAGAATCACTTTTAGAAGATCTGGAGTCTGCTTTGAGCCATGTTGCTGTTCTTGAGAAAGAAGGATTAGACACCCCAGATGCTAAAAGTGAATCAAGTAATCAGGAAAACCAAATTGAAGAGGGAGCAAATGGCATGACTCAGACACTTAACTTGAATGATCTTGCAGACTCTGTTGCTGATGAGTTTCTAAGCATGCTTGGAGTAGAAGATGCTCCTTTTTGTTTTAGTTCTGATGCAGAACCTGAGTCCCCAAGAGAGCGTCTTTTAAGGGAATTTCAAAGAGAAGCTGAGGCCAGTGGATGCTCATTGTTTGGCTTTGATATTGACGAAGAAACTGATGCATATTACGATGAAGAAGATGTGGAAGATTATGATTATTATGCTCCCACTATATCTGGGTGGGAGGAATTTTCTGAGGAAATTGATTCCTTGCCAGTTGGTGAACCAGAATATCCTAAGATTAGGGCCAAGGTGATGGAGGATTTGGAGACACAAGCACTTATGGAAGAGTGGGGCTTGAGTGAGAATGCTTTCCATAGCTCTCCACCAAACAGTTCTGGTGGCTTTGGCAGTCCAATCGATCTCCCTCCTACAGAGCCTTCTCCATTGCCTCCTCTTGCAGAAGATTTAGGTCCATTTGTCCAAACAAAAACTGGAGGATTTTTGCGATCCATGAACCCTGCCCTTTTCAGGAGTTCTAAGACCGGTGGGAGCCTAATCATGCAGGTTTCTAGTCCTATTGTAGTTCCTGCTGAATTAGGGTCTGAGGTAATCGAAATACTGCAGCATTTGGCATCAGTGGGGCTTGAAAAATTGTCTGCTCAAGCCAATAAGTTAATGCCTTTGGAAGATATTACGGGGAAAACAATGGAACAAATAGCTTGGGAAGCAGTACCTGGTTTGGAAGCTTCTGAAAGGAAAACTCTGGCTCAGACTGAGCAAGAAGGTGTTCATATATCATCTACTGCAAGAAAAAGGAGTAAGGGGGCTTCTGCTAGCCAAAAATCAAAGAAATCTACATCAAGCGGTGCACGTGATGATGTGGATTCTGAATATGTATCTCTTGAAGATCTAGCTCCCTTGGCCATGGATAAGATTGAAGCATTATCAATTGAGGGTTTGAGAATACAGTCTGGCATGTCAGATGAGGAGGCACCTTCAAACATCAGTGCACAGTCTATCAGAGAATTCTCAGCCCTTGAAGGCAGAAGTGTGAATTCCACTGCATTCATGGGCTTGGAAGGAGCAGCAGGATTGCAGCTTTTGGACCTGAAGGACAGTGCAGCTGATGGCACTGATGGACTCATGGGTCTATCTTTAACGCTGGATGAATGGATGAGGCTGGATTCTGGAGAAATTGACGAAGAAGAGCAAATGAGTGAGAGAACTTCAAAACTTCTTGCTGCCCACCATGCTAAGTGTACAGATTTGAATTTTCTGGGTAAGAAAAAGCAGGGCAAAGCCTCTGGAAGTAAGTGTGGTTTGTTGGGCAACAACTTCACTGTTGCCTTGATGGTCCAGCTACGTGATCCGTTAAGGAACTATGAGCCAGTTGGCACGCCAATGCTTGCTCTTATTCAAGTGGAAAGGGTTTTTCTTCCTCCAAAACCAGAGATATACGGCACGGTTGCACAGGCAACAGACTGTAATGATGAAGATGATGAGCTTGAGTCAGTTGCCAAGGAAGATACAAAAGTGGAGCCTAAGGAAGAGAAAATCCAGGAACAAGAATTAATTCCTCAGTACAAAATCAGTGAAGTGCATGTTGCTGGTCTGAAAACTGAACCTGGTAAGAAAAAGCTATGGGGCAGTGCTGCACAGCAGCAATCTGGATCCCGTTGGTTGCTCGCCAACGGAATGGGGAAAAACAAGCATCCATTTATGAAATCCAAATCTGTTGCAAAATCTCCGTTGCCAGCTACAGTTACAGCTCAGCCTGGTGATACTTTGTGGAGTATTTCTGCTCGATTTCATGGAAATGGGGCAAAATGGAAGGAATTGGCTGCTCTTAATCCTCACATTAGGAACCCAAATGTTATTGTTTCAAATGAAACCATCAAGCTACGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_7128.p1 GENE.S_Transcript_7128~~S_Transcript_7128.p1 ORF type:complete len:1180 (+),score=358.89,NT-C2|PF10358.5|1.5e-17,NT-C2|PF10358.5|7.8e+03,LysM|PF01476.16|1.7e-08 S_Transcript_7128:374-3913(+)
MMSKSEARKKNNDDLNNGKLLNEIEAISKALYLDKNPSKSSSSIARNRPKSADGGNALLPNSKSKRVTDDPSLKDKKSFWNWKPLKALSQVRNRRFNCCFTLEVHKIAGLPTKFSGLSLSVHWKRRDGEVVTSPIKVVEGVAEFEEKLIHTCSVYGSRSGPHHSAKYDAKHFLLYAAVLGNPKLDLGKHRIDLTRLLPLTLEELEDEKSSGTWTTSFKLSGEAKGAVMNVSFGYVVLGDSLAPNDKSVPQLLESKSTIKSRMKTDQYDGKGSIRRVGSLPTSQKQSMTSRSINDIKILREVVPIKTSEISNSANTLREKFDEEKSVVDEKCETAVFLDDSKPLKPASCSPSDSSKGHIVDENNKFEITESLDDSKSLKPASSLSSDSSKGSIVDANGKCEIDTKPLNPTSSFPSDTSKGHTVDESEDAEFSVIEKGMESFGEKLGLDEDKAKDADELIIKSPDLPVVHSNVEDGAEDGADLNREKIVCSKESLLEDLESALSHVAVLEKEGLDTPDAKSESSNQENQIEEGANGMTQTLNLNDLADSVADEFLSMLGVEDAPFCFSSDAEPESPRERLLREFQREAEASGCSLFGFDIDEETDAYYDEEDVEDYDYYAPTISGWEEFSEEIDSLPVGEPEYPKIRAKVMEDLETQALMEEWGLSENAFHSSPPNSSGGFGSPIDLPPTEPSPLPPLAEDLGPFVQTKTGGFLRSMNPALFRSSKTGGSLIMQVSSPIVVPAELGSEVIEILQHLASVGLEKLSAQANKLMPLEDITGKTMEQIAWEAVPGLEASERKTLAQTEQEGVHISSTARKRSKGASASQKSKKSTSSGARDDVDSEYVSLEDLAPLAMDKIEALSIEGLRIQSGMSDEEAPSNISAQSIREFSALEGRSVNSTAFMGLEGAAGLQLLDLKDSAADGTDGLMGLSLTLDEWMRLDSGEIDEEEQMSERTSKLLAAHHAKCTDLNFLGKKKQGKASGSKCGLLGNNFTVALMVQLRDPLRNYEPVGTPMLALIQVERVFLPPKPEIYGTVAQATDCNDEDDELESVAKEDTKVEPKEEKIQEQELIPQYKISEVHVAGLKTEPGKKKLWGSAAQQQSGSRWLLANGMGKNKHPFMKSKSVAKSPLPATVTAQPGDTLWSISARFHGNGAKWKELAALNPHIRNPNVIVSNETIKLR*

Click here to download the sequence:
Link to NCBI Protein BLAST