Transcript Information: S_Transcript_71291.p1


Annotated TAIR IDAT4G01590.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: Arabidopsis protein of unknown function (DUF241) (TAIR:AT4G35680.1); Has 1908 Blast hits to 1345 proteins in 175 species: Archae - 3; Bacteria - 106; Metazoa - 494; Fungi - 346; Plants - 115; Viruses - 71; Other Eukaryotes - 773 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:689077-690192 | Reverse length=200
E-Value9E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 132.056569669649
Replicate 222.480645420347
Replicate 321.865819674875
Condition 2: 8 Hour
Replicate 127.383739839046
Replicate 228.30377820329
Replicate 328.178904599009
Condition 3: 24 Hour
Replicate 124.492748156121
Replicate 221.461942780632
Replicate 324.83989221716


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_71291.p1 GENE.S_Transcript_71291~~S_Transcript_71291.p1 ORF type:5prime_partial len:264 (-),score=71.52,RNA_pol_3_Rpc31|PF11705.4|1e-22 S_Transcript_71291:242-1033(-)
CCCCTTCTCACAGTCACTCTCAAGTCTCACTATAACTCTATTCCTTCCCCTTCGCTGTTACTCCGGCGCCGGCGCCGACGTCGCTCTCTCTCCCTCCCAAGTTCGCAGGCGCGGCTGTATGATAACGGTTATCTGCTTCAAAATTGGAAAACCCTAATTCAAGAAATGGCATTTAGAGGAGGACGAGGTCGAGGAAGAGGAGGATTTGGTAGAGGAGGTCCCTTCAGATTTGCCAAGCAAGAGTCTGTTCCTCTTTTCCCTGATATAGAGTTGCCTGACAGAAGCAAAATTACTAAAGATGATGACCTATTACGAAATTGTGTTATAGTTCGAAGATTGATTGCAGAAACGCCTTACCGCCTTGAAGACAACCCCTTAGGCAGTAAAGAAGAAAGTGTGGACATCGAGAGATATTCTGATAGGGCGAAGAGGATCAATAGATTTGGTCAGCAGTCTCTTGAAAGATCTGGTTTACTGCTTGAACCTGGATATTTTCCTGTTGAGCTTGTTCGAGGGGAAAGATGCAAGACAGGGAGGAAGGTGGTTTGGAATCCGAAACGAGAGCTGAAAAGGTTGGATCTATTTGAACAGCTTGAAGAGAAGTTAAAAGATAAAGAGCCAAAAAGCAAAAATGAGAAGGAAGATGATGAAGATGAAGAAGATGAAGAGGAAGAGATAGAAGGAGAAGAGGAAGACAGTGATGATGGTGATTATGCGGAGAACTTTGGTTATGATGACGATGAAGATGACTTCAACATGGAGGGCGATGGAGATGATGAAGCCCTCTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_71291.p1 GENE.S_Transcript_71291~~S_Transcript_71291.p1 ORF type:5prime_partial len:264 (-),score=71.52,RNA_pol_3_Rpc31|PF11705.4|1e-22 S_Transcript_71291:242-1033(-)
PLLTVTLKSHYNSIPSPSLLLRRRRRRRSLSLPSSQARLYDNGYLLQNWKTLIQEMAFRGGRGRGRGGFGRGGPFRFAKQESVPLFPDIELPDRSKITKDDDLLRNCVIVRRLIAETPYRLEDNPLGSKEESVDIERYSDRAKRINRFGQQSLERSGLLLEPGYFPVELVRGERCKTGRKVVWNPKRELKRLDLFEQLEEKLKDKEPKSKNEKEDDEDEEDEEEEIEGEEEDSDDGDYAENFGYDDDEDDFNMEGDGDDEALL*

Click here to download the sequence:
Link to NCBI Protein BLAST