Transcript Information: S_Transcript_71403.p1


Annotated TAIR IDAT5G58250.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2488 (InterPro:IPR019616); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23559558-23560372 | Forward length=211
E-Value2.2E-78
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1358.26168805645
Replicate 2408.6869113273
Replicate 3500.67637339337
Condition 2: 8 Hour
Replicate 1215.89418959155
Replicate 2258.23505286999
Replicate 3256.19618740463
Condition 3: 24 Hour
Replicate 1370.7388798118
Replicate 2437.51948633577
Replicate 3432.25779911435


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_71403.p1 GENE.S_Transcript_71403~~S_Transcript_71403.p1 ORF type:5prime_partial len:210 (+),score=53.90,Ycf54|PF10674.5|5.3e-34 S_Transcript_71403:1-630(+)
CTTCATTTTCAGCCCAAACCCTCCCTTGTCTTTCCAAACACCAGCAATACTCGTCCCCATTTGGTATCTCTTTCTTCTTCTTCTTCTTCTTCTGCAGTGTCACTCTTTGGTGGTGGTGGTGGTGCTATAAACTCCTCTTCTTTCCTCAGAACTTCCGCTGTTGCTGCTGATACCAGTCAACCCAGTTCCTCTTCTAACGAGGATCAGACGAAAAAGAAGTATTATTTTGTTGTTGCAAATGCAAAATTTATGCTTGATGAAGAGGAGCATTTCCAGGAGGTCCTGTTTGAGCGGCTTCGCAACTTTGGAGAGCGTAAAATAGAGCAAGACTTTTGGCTTGTTATTGAACCTAAGTTTCTTGAGAAATTCCCCAACATAACAAAGAGATTAAATAGACCTGCTGTGGCCTTGGTATCAACCAATGGCCCATGGATCACATTTATGAAACTAAGATTGGATCGTGTGTTAGCTGAAAGTTATGAAGCAGACAGCTTAGAAGAAGCATTGGCCTCAAATCCTACTAAAATAGAGTTCGAGAAACCAGAAAAGTGGTTGGCACCTTATCCCAAATATGAATACGGTTGGTGGGAGCCTTTCCTACCTCCTGGATCCCAAAAGCCTGAGGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_71403.p1 GENE.S_Transcript_71403~~S_Transcript_71403.p1 ORF type:5prime_partial len:210 (+),score=53.90,Ycf54|PF10674.5|5.3e-34 S_Transcript_71403:1-630(+)
LHFQPKPSLVFPNTSNTRPHLVSLSSSSSSSAVSLFGGGGGAINSSSFLRTSAVAADTSQPSSSSNEDQTKKKYYFVVANAKFMLDEEEHFQEVLFERLRNFGERKIEQDFWLVIEPKFLEKFPNITKRLNRPAVALVSTNGPWITFMKLRLDRVLAESYEADSLEEALASNPTKIEFEKPEKWLAPYPKYEYGWWEPFLPPGSQKPEA*

Click here to download the sequence:
Link to NCBI Protein BLAST