Transcript Information: S_Transcript_71521.p1


Annotated TAIR IDAT1G03440.1
Annotated Gene NameLeucine-rich repeat (LRR) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:852681-853874 | Forward length=397
E-Value6.9E-207
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.7854350511262
Replicate 25.6990837475933
Replicate 35.0469891584278
Condition 2: 8 Hour
Replicate 13.3815196922308
Replicate 24.0051902935572
Replicate 34.1977500398557
Condition 3: 24 Hour
Replicate 13.6315023705591
Replicate 26.5498995092769
Replicate 33.9994034606578


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_71521.p1 GENE.S_Transcript_71521~~S_Transcript_71521.p1 ORF type:3prime_partial len:391 (+),score=22.63,LRR_4|PF12799.3|71,LRR_4|PF12799.3|0.0011,LRR_4|PF12799.3|1.1,LRR_4|PF12799.3|4.4,LRR_4|PF12799.3|18,LRR_4|PF12799.3|0.12,LRR_4|PF12799.3|2.9e+02,LRR_8|PF13855.2|0.00021,LRR_8|PF13855.2|0.25,LRR_8|PF13855.2|0.0086,LRR_8|PF13855.2|0.12,LRR_8|PF13855.2|79,LRR_8|PF13855.2|0.85,LRR_1|PF00560.29|7.1e+02,LRR_1|PF00560.29|0.062,LRR_1|PF00560.29|8.9e+02,LRR_1|PF00560.29|5.6e+02,LRR_1|PF00560.29|6.3e+02,LRR_1|PF00560.29|6.5,LRR_1|PF00560.29|49,LRR_1|PF00560.29|35,LRR_1|PF00560.29|18,LRR_1|PF00560.29|1.6e+04,LRRNT_2|PF08263.8|4.3e-08 S_Transcript_71521:138-1307(+)
ATGGGGTTGAAGAAGAAGATGTGGGTTTACATATTGGTGTGGTTGCAATGTTGGTGGATATCAATGGCGATACTTGACCCACTTGATTTTCTGGCATTGCAATCGATTCGAAAGGCATTAGACGACGTATCCGGGTCGAAATTCTTCGAGTCCTGGGATTTTACATCCGACCCGTGTAATTTCCCCGGAGTTTACTGTGATTCCAATCGGGTTATTGCTCTCAATCTTGGTGACCCGAAAGCCGGTTCACCCGGTTTGAAGGGTAGGATTGACCCGGCTATTGGGAAGTTATCAGCTCTGGCAGAGTTCACCATTGTTCCGGGTCGGATCATGGGTCGGATCCCTGAAACGGTTTCTCAGTTGTCTAATCTTCGGTTCTTTGCTGTGAGCCGGAACTTTCTTTCGGGTGATATTCCTGCTGGTTTGGGTCAGTTGAGACAGTTGCGTACTCTTGATTTGAGCTATAATCAGCTCACTGGTTCAATCCCTTGGCCACTCGGTTCACTTCCGGTTCTCTCTAACCTCATTCTCTGCCATAACCATCTCAGTGGTTCGCTCCCTCCTTTTAGTTCTCAGTCATTGGTTCGGGTCGATTTGATGCACAACAATCTCACCGGTTCGATTGAACCGGATTCTCTCCCACCTTCAGTTCACTACCTTTCTCTTGGTTGGAACAAATTCAGCGGTCCGATTTTCCGACTTTTGCCCCGGTTAAACAAGTTAAACTATCTCGACTTGAGTATGAACCAGTTCACCGGTCTAATCCCATCTGAGATATTTTCATTCCCCATCACCAACCTACAACTCCAAAGAAACCAGTTCTTTGGGCCGGTCCAACCGGGTGAGCAAGTGACAATCGAAACCGTTGATTTGAGCTACAACAGGCTATCAGGTCAGATATCACCAATGCTGTCAACGGTTCAGAATCTTTATCTGAATAATAACCGGTTCATGGGATTAGTTCCGGCCAGCATAGTGAACCGGTTGTTGGATTCCACAATACAAACGTTGTATTTGCAGCATAATTATCTAACGGGAATAGAGATAAATCCAACGGCTGAGATTCCTCTAAGTAGCTCCTTATGTTTGCAGTACAATTGCATGGTCCCACCGGTTCAGTCCGCTTGCCCGTTAAAAGCTGGTTATGAGAAAACACGCCCAACTGCACAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_71521.p1 GENE.S_Transcript_71521~~S_Transcript_71521.p1 ORF type:3prime_partial len:391 (+),score=22.63,LRR_4|PF12799.3|71,LRR_4|PF12799.3|0.0011,LRR_4|PF12799.3|1.1,LRR_4|PF12799.3|4.4,LRR_4|PF12799.3|18,LRR_4|PF12799.3|0.12,LRR_4|PF12799.3|2.9e+02,LRR_8|PF13855.2|0.00021,LRR_8|PF13855.2|0.25,LRR_8|PF13855.2|0.0086,LRR_8|PF13855.2|0.12,LRR_8|PF13855.2|79,LRR_8|PF13855.2|0.85,LRR_1|PF00560.29|7.1e+02,LRR_1|PF00560.29|0.062,LRR_1|PF00560.29|8.9e+02,LRR_1|PF00560.29|5.6e+02,LRR_1|PF00560.29|6.3e+02,LRR_1|PF00560.29|6.5,LRR_1|PF00560.29|49,LRR_1|PF00560.29|35,LRR_1|PF00560.29|18,LRR_1|PF00560.29|1.6e+04,LRRNT_2|PF08263.8|4.3e-08 S_Transcript_71521:138-1307(+)
MGLKKKMWVYILVWLQCWWISMAILDPLDFLALQSIRKALDDVSGSKFFESWDFTSDPCNFPGVYCDSNRVIALNLGDPKAGSPGLKGRIDPAIGKLSALAEFTIVPGRIMGRIPETVSQLSNLRFFAVSRNFLSGDIPAGLGQLRQLRTLDLSYNQLTGSIPWPLGSLPVLSNLILCHNHLSGSLPPFSSQSLVRVDLMHNNLTGSIEPDSLPPSVHYLSLGWNKFSGPIFRLLPRLNKLNYLDLSMNQFTGLIPSEIFSFPITNLQLQRNQFFGPVQPGEQVTIETVDLSYNRLSGQISPMLSTVQNLYLNNNRFMGLVPASIVNRLLDSTIQTLYLQHNYLTGIEINPTAEIPLSSSLCLQYNCMVPPVQSACPLKAGYEKTRPTAQ

Click here to download the sequence:
Link to NCBI Protein BLAST