Transcript Information: S_Transcript_71569.p1


Annotated TAIR IDAT5G43310.1
Annotated Gene NameCOP1-interacting protein-related
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:17379735-17385387 | Reverse length=1237
E-Value1.6E-174
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.703763515447
Replicate 27.6502552026058
Replicate 36.6376720424723
Condition 2: 8 Hour
Replicate 110.992809559761
Replicate 210.85692654575
Replicate 311.86230218884
Condition 3: 24 Hour
Replicate 16.4756891462055
Replicate 26.472868786124
Replicate 36.7154669313931


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_71569.p1 GENE.S_Transcript_71569~~S_Transcript_71569.p1 ORF type:complete len:1292 (+),score=351.01 S_Transcript_71569:428-4303(+)
ATGAAGTCCAACACTAGGCTTGATTCTATTGTCTTCCAGCTCACTCCCACTAGAACCAGGTGTGATCTAGTTATCACTGCTAATGGGAAAACTGAGAAGATTGCTTCAGGTTTGTTGAACCCTTTCCTAGCCCATTTAAAGGCAGCTCAGGATCAGATTGAGAAGGGAGGATATTCTATTATCCTTGAACCAAAGCAAGGAAGTGAGGCACAATGGTTTACCAAGGGAACCGTAGAAAGGTTTGTTCGTTTTGTGAGTACTCCAGAGATCCTTGAGCGGGTGTACACAATAGAATCTGAAATCTTACAGATTGAAAAGGCAATTTCTGTTCAGAACCATTGTGAAACGGGGGTTCATACTGTAGAAGATATTCCAGCAAAGTCTGAGGATAACATTGAAGGCAGCAAACCTGCACTGGGTGGTAATGAGGAGAAAGCAATTGTGCTTTACCAGCCTGTCAGCGATCAACAAGAGGATGATGACTCTAACATGCAGGAAAAAAATTCAAAAGTTCAACTTGTACGAGTTCTTGAGACACGTAAAACAGTGCTTCAAAAGGAGCAAGGCATGGCCTTTGCACGTGCTGTTGCTGCTAGCTTTGACGTTGATAACATATCTGCGCTACTCTCTTTTGCTGAATGTTTTGGTGCTTGTCGTATGATGGATGCATCCAAAAGATTTGTGGAACTATGGAAGGCAAAGCATGAAAGTGGTCTGTGGGTTGAAGTTGAAGCAACAGAAGCAATGTCCTGCAGGTCAGACTTGCCAGTGAATGCATCAGGCATTATGTTTCTGAGCCCAAATGAACAGGGCGAGGTTGCTTCTGAGAAAGCTGGGGTATCATGTGAAACTGGTGCAGATGTAAAGCCTCGAGCAGATCATCAAGGGCAATTAAACCCACAGGAGTGCAGCCCTGGCCAGTTTCCATACCCTATGTTTGCACCGTGGCAAATGCATCCTCAAGCAAATGGCATGCCACTCTTCCAACCGTATCCCATGCAAGGCATGCCGTACTATCCGAATTATCCAGGGAACAGCCCATTTTTGCAGTCACCATATACTCCGGTTGATGAATCTAGATCACATTCTGGCCAGAGGACAAGACAGAGAAGGCATTCAATGGATAGCAGGGATCTGAGTGCTGATTTTGAAGCTCAAGAGGTTGATATGGATACTGATGAAGAAGATTCTGCAAGTCATAGATCAAGGAAGAAAGGCGGCAGATCTTCCAAAAAGCAGTCTGGAACTGTTGTGATTCGTAATATTAATTACATTGCTGCATCGAAGGAAGGTGGTTCCAATAGTGATGCAGAATCTTGTTCAGGTTCTGGAAGTGATGATGAGGAGGAAAATGTGAGGTTTGATGAAACGAGAAAATCAAAAAAAGTTTATTCAAAATCAAATGATGCACGGAAGTCATCTCGTAAGGAAGAAATAGTGTCTGGACAGGCAGGAGATGATGGACACTGGCAAGCATTTCAGAACTTCTTACTCAAAGATGCCGATGAATGCAGTAATTCTGCTAACAGCAATATGTTTGCAATGGAAGGAAAAGTTCAAGGTAGAAAGCGATCAAGTGCCATTGGGGATGCTTCTTCAGTTCTTGGAGGACGTAATATGGGTGAAAATCACGATGTTGGTTTTGGTGAACATCATGACATTAGTGGAGACATGACCTGCATGCGAAAATCAATGGAAGATGGAATGTTGAGTTATGGAGGGGAAGCTACCTCAGGCAGTGCAGATGGTCGAATTGATCTGGAACTTGCAGAGGCAGGGGGTCGAAGAGGCTCTTACAGGAGAGGCGCTGATGCAAGCATGAATTACATGATTAATCGGCCAGAAAAGTTGACAGATGTATGGGACTCTTCTTTGGATCCGGTTATTTCTAATGGTTTTCAGGGTTCTTCAAATAACAATAACAAGGGTTCGTCACATGGAGTGTCTGACGAATCTGTTATGATCATGCATAGATCAGGATCATTAGATCACGTTTCAGGTAATGGCAGGACTGCTATGGACATGAATTATGAGCTCCCCTCTCCACTTCAAAAAGAAGAAAGCCATACTGTCGCGACTAAGAGCCTAAGTAATTATGAGCCAAACTTGATGCCTGATCGTGTGATGGAAGATGGGCCAAGTGGCTATGCTCCAGCTCTTGAATATGAGTTGCAGGCTCAAGCTAAAGAAGCTGCTAAGCTAAGCGAGAAGAAGAAAGCAGTTACTACAAATGCCAAAGAAGGGCCAAGGAAGGGGCTCAAAGATCAGAAGCTGAAAGCTCAAAAAGGAACGGCATCAAGTACAAAACGAGAGAAGCCTTCTAAATTGAGCCCTTCAGAAGATGCACGCGCTCGTGCTGAAAGGCTACGAGCTTTCAAGGCTGATTTACAAAAGCTAAAGAAAGAAAAGGAAGAGGAACAACTGAAAAGATTAGAAGCATTAAAGATTGAGAGACAAAAGAGAATTGCTGCTAGAAGCGGTGCCAATCCTGCTCAGTCACCTTTATCCACACCACAGGCTAGGAAACAGCTGCCAAAGCTTTCACCTGTTTCTCAGAAAGGTTCTAAGTTCAGTGACACGGAGCCTGGATCATCGTCACCATTACAGAGATCTACCTTAAAAATTGTCCCTAGGGTATCATCTGATTCTAATAAAGCTCCCAAGTCTGGCAGATTAAATGGAGGACATCGGTTAACTAGGTCAGCTTCATCATTGAGCGTGAGGAAGGGAGAAAACAATAATAATACACCAGAAACAAAGGCAACAATGGCGAGAATCAGAAGATTGTCAGAGCCTAAGAGCACTGTTAATCAAATCTCTTCAGCAAAGACACGAAGTGTTGAGGCAATCTCTAGACAAAGAGTATCCGAGGGACCTGAGATGAAAAGGTTGCCTGTAACAGCAAACCCGGAGAAAGCAAAATCTGCTATTCCTCCAGAATCGAAATTGCGAGCATCTAAAGCATCCTCAGTTTCTTCTCAGAAAAGATCCACATCTAAAGAAACATTGCAGAAGCCAAACGACAAAATGCTATCTCCTGCTAGTGCTAATAGTAGGGGAAATGCCAAAGCTGTATCCCCTAGTGACGGAGATGACAACACTGTAGTTGAAAAGACTGTTGTGGTGCTCGAGTGTGAGAAACCCTCTATACCAATCAAACATGAGTCTGAGGACACGACAAGAGTCCAAACTACTCAGCCTGATGCATACAATCCAAGTGTTAAATCAGACGATGATGTAGCCATTCCTCCACCAGCTTCACCCATCACCGTCAAGGAAATTGACAGAGAATCATCTGAAGGTCAAGTCAAAGGGCAATTTGACACCCACTTGCATGAGACAGGAGCAGTCTATACAGAAAAGGTATTACCGGATATAAACAATGATGGCACTACTGAAAAAGCATATCAGGCACCGTATGCTAGAGTCTCATCTCTAGAGGATCCCTGCATGGTTAAGTCGAACTATGGGAAGGCACCTCCAACAAGCTTAGAGATGGCAGCAGCCAGTGTAGAGACCACCACGATTAATGTATCTGATGGTCAGAGGCAAAACATAGTTAAGATATCCGAAGTTGTTTCAGAGAAGCAACAAGGAAAGGAATCATCAAAAGGTTTCAGGCGGCTATTAAAGTTTGGGAAGAAAAGTTCAGCTGCAAGTGGATCTAATGTAGAGTCAGATAAAGCAAGTCTTGATGGCTCTGTGGCTGATGATAGTGCATTGAATAGCTCTTCCAGTGAAGTTTTTACCTTGAAGAACCTTCTCACTCAAGAGGAAAGTTCCAGTGCAGGCACTACTCCAAAGAAGTCTTCTCGATCTTTCTCGATACTGTCACCCTTCAAAAGCAAGAACAGTGGGAAGAAGTTGAGCACATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_71569.p1 GENE.S_Transcript_71569~~S_Transcript_71569.p1 ORF type:complete len:1292 (+),score=351.01 S_Transcript_71569:428-4303(+)
MKSNTRLDSIVFQLTPTRTRCDLVITANGKTEKIASGLLNPFLAHLKAAQDQIEKGGYSIILEPKQGSEAQWFTKGTVERFVRFVSTPEILERVYTIESEILQIEKAISVQNHCETGVHTVEDIPAKSEDNIEGSKPALGGNEEKAIVLYQPVSDQQEDDDSNMQEKNSKVQLVRVLETRKTVLQKEQGMAFARAVAASFDVDNISALLSFAECFGACRMMDASKRFVELWKAKHESGLWVEVEATEAMSCRSDLPVNASGIMFLSPNEQGEVASEKAGVSCETGADVKPRADHQGQLNPQECSPGQFPYPMFAPWQMHPQANGMPLFQPYPMQGMPYYPNYPGNSPFLQSPYTPVDESRSHSGQRTRQRRHSMDSRDLSADFEAQEVDMDTDEEDSASHRSRKKGGRSSKKQSGTVVIRNINYIAASKEGGSNSDAESCSGSGSDDEEENVRFDETRKSKKVYSKSNDARKSSRKEEIVSGQAGDDGHWQAFQNFLLKDADECSNSANSNMFAMEGKVQGRKRSSAIGDASSVLGGRNMGENHDVGFGEHHDISGDMTCMRKSMEDGMLSYGGEATSGSADGRIDLELAEAGGRRGSYRRGADASMNYMINRPEKLTDVWDSSLDPVISNGFQGSSNNNNKGSSHGVSDESVMIMHRSGSLDHVSGNGRTAMDMNYELPSPLQKEESHTVATKSLSNYEPNLMPDRVMEDGPSGYAPALEYELQAQAKEAAKLSEKKKAVTTNAKEGPRKGLKDQKLKAQKGTASSTKREKPSKLSPSEDARARAERLRAFKADLQKLKKEKEEEQLKRLEALKIERQKRIAARSGANPAQSPLSTPQARKQLPKLSPVSQKGSKFSDTEPGSSSPLQRSTLKIVPRVSSDSNKAPKSGRLNGGHRLTRSASSLSVRKGENNNNTPETKATMARIRRLSEPKSTVNQISSAKTRSVEAISRQRVSEGPEMKRLPVTANPEKAKSAIPPESKLRASKASSVSSQKRSTSKETLQKPNDKMLSPASANSRGNAKAVSPSDGDDNTVVEKTVVVLECEKPSIPIKHESEDTTRVQTTQPDAYNPSVKSDDDVAIPPPASPITVKEIDRESSEGQVKGQFDTHLHETGAVYTEKVLPDINNDGTTEKAYQAPYARVSSLEDPCMVKSNYGKAPPTSLEMAAASVETTTINVSDGQRQNIVKISEVVSEKQQGKESSKGFRRLLKFGKKSSAASGSNVESDKASLDGSVADDSALNSSSSEVFTLKNLLTQEESSSAGTTPKKSSRSFSILSPFKSKNSGKKLST*

Click here to download the sequence:
Link to NCBI Protein BLAST