Transcript Information: S_Transcript_71589.p1


Annotated TAIR IDAT5G03740.1
Annotated Gene Namehistone deacetylase 2C
Annotated Gene Symbol(s)HD2C, HDT3
Annotation TypeOrtholog
Chromosome Positionchr5:981994-983961 | Forward length=294
E-Value1.3E-74
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 145.082133239923
Replicate 237.19328184969
Replicate 331.695303269357
Condition 2: 8 Hour
Replicate 149.700977979548
Replicate 244.071319314871
Replicate 341.175694690497
Condition 3: 24 Hour
Replicate 133.543236398126
Replicate 234.181486311868
Replicate 338.1087173662


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_71589.p1 GENE.S_Transcript_71589~~S_Transcript_71589.p1 ORF type:5prime_partial len:366 (+),score=139.21 S_Transcript_71589:1-1098(+)
CTTTCTCGAACCCTACAACGTTTTATATTTCTCTCACATGACACTCCACTCTCTGACAGGTTGCAACAAAATAACACTCCCTCTTCTCTGATCGTTTCATTTCCTTCAGTCAGTTCGAGCCCTACTTGCCCGCCTTTCGCTCTCTCTTTGATCATGATGCAGTTTTGGGGTGCTGAGGTAAAACATGGAAGCACCCTAAAGGTGCAACCTGGTGATGACAAACTTGTGCACCTGTCACAGGCCTGTCTTGCAGACATTAAGAAGGACAAAGGAAATGAATTTATTCGTCTCTATGCTCAGAAGGGTGACCAGAAGCTTGTCATTGGGATTCTTTCCCCTGAAAAATTCCCCCATGTAAATCTTGACCTCATATTTGAAGATGAGTTTGAGCTATCTCATGACTGGAAACATGGAAATGTGCACTTTGCTGGATATAAAGCTGATAACCCAGATCCAATGCATGAAGAATATGAATCTGAATCTGATGAGGAGCTTGAGGTGCGTGATTCTGTTGAGGTTCTGAACAATGGAAAACCTGAAGCAAAAGAGTTGAAGACGGCTGGTAATAAGGCCAGTTCTAGTGTGAAGCCTGAAAATGCAGAAGGTAAGCTGAAGGTGACGATTGTGGAACCTGCCAAGAAGAATGAAGAGGATGAGGAATCTGATGATGATGATGAGGACGATGAGGATGAATCTGATGAGGATGAAGAAGAAGAGGATGAGGATATGCTGAGTGATGAAGGGGGAAGTGAGGACGATGATAGTAGTGATGAGGAAGAGGTGAGTGATGAGGAGACACCGAAAAAGCCTGAATCAAGCAAGAAGCGGCCTGCACAATCAACATCAAAGACTCCTGTTCCTGACAAGAAGGCAAAATTCTCTACTCCACAACAGAAGACTGATGGCAAGAAAGTTAGCGGCCACATTGCTACTCCTCATCCTGCAAAGCAGGCTGCAAAAACACCTGCTAATGCTGACAGGTCCAACAAGCAGACGCCCAAAGCTGGTGGATCCGTTTCTTGCAGTTCTTGCAACAGGTCTTTTGGTTCTGAACAAGCTCTACAATCTCATTCTAAGGCCAAGCATGGTGCTCAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_71589.p1 GENE.S_Transcript_71589~~S_Transcript_71589.p1 ORF type:5prime_partial len:366 (+),score=139.21 S_Transcript_71589:1-1098(+)
LSRTLQRFIFLSHDTPLSDRLQQNNTPSSLIVSFPSVSSSPTCPPFALSLIMMQFWGAEVKHGSTLKVQPGDDKLVHLSQACLADIKKDKGNEFIRLYAQKGDQKLVIGILSPEKFPHVNLDLIFEDEFELSHDWKHGNVHFAGYKADNPDPMHEEYESESDEELEVRDSVEVLNNGKPEAKELKTAGNKASSSVKPENAEGKLKVTIVEPAKKNEEDEESDDDDEDDEDESDEDEEEEDEDMLSDEGGSEDDDSSDEEEVSDEETPKKPESSKKRPAQSTSKTPVPDKKAKFSTPQQKTDGKKVSGHIATPHPAKQAAKTPANADRSNKQTPKAGGSVSCSSCNRSFGSEQALQSHSKAKHGAQ*

Click here to download the sequence:
Link to NCBI Protein BLAST