Transcript Information: S_Transcript_71593.p1


Annotated TAIR IDAT5G03740.1
Annotated Gene Namehistone deacetylase 2C
Annotated Gene Symbol(s)HD2C, HDT3
Annotation TypeHomolog
Chromosome Positionchr5:981994-983961 | Forward length=294
E-Value1E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2508508507367
Replicate 21.9757721991804
Replicate 31.2845686824398
Condition 2: 8 Hour
Replicate 12.9707011387051
Replicate 24.0068982638316
Replicate 31.5907348958941
Condition 3: 24 Hour
Replicate 12.1736202478203
Replicate 22.2551056294873
Replicate 31.8822421197848


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_71593.p1 GENE.S_Transcript_71593~~S_Transcript_71593.p1 ORF type:5prime_partial len:201 (+),score=50.38 S_Transcript_71593:1-603(+)
CTTTCTCGAACCCTACAACGTTTTATATTTCTCTCACATGACACTCCACTCTTTGACAACATCATAACACTCACTTCTCATCTCGTTTCATTTCCTTCAGTCAGTTCGAGCCCTACTTGCCCGCCTTTCGCTCTCTCTTTGATCATGATGCAGTTTTGGGGTGCTGAGGTAAAACATGGAAGCACCCTAAAGGTGCAACCTGGTGATGACAAACTTGTGCACCTGTCACAGGCCTGTCTTGCAGACATTAAGAAGGACAAAGGAAATGAATTTATTCGTCTCTATGCTCAGAAGGTTGACCAGAAGCTTGTAATTGGGATTCTTTCCTCTGAAAAATTCCCTCATGTAAATCTTGACCTCATATTTGAAGATGAGTTTGAGCTATCTCATGACTGGAAACATGGAAATGTGCACTTTGCTGGATATAAAGCTGATAACCCAGATCCAATGCATGAAGAATATGAATCTGAATCTGATGAAGAGCTTGAGGTGCATGATCCTGTTGAGGTTTTGAACAATGGAAAACCTGAAGCGAAAGAGTCGAAGACGGCTGGTAATAAGGCCAGTTCTAGTGTGAAGATGCAGAAGGTAAGCCAAAGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_71593.p1 GENE.S_Transcript_71593~~S_Transcript_71593.p1 ORF type:5prime_partial len:201 (+),score=50.38 S_Transcript_71593:1-603(+)
LSRTLQRFIFLSHDTPLFDNIITLTSHLVSFPSVSSSPTCPPFALSLIMMQFWGAEVKHGSTLKVQPGDDKLVHLSQACLADIKKDKGNEFIRLYAQKVDQKLVIGILSSEKFPHVNLDLIFEDEFELSHDWKHGNVHFAGYKADNPDPMHEEYESESDEELEVHDPVEVLNNGKPEAKESKTAGNKASSSVKMQKVSQR*

Click here to download the sequence:
Link to NCBI Protein BLAST