Transcript Information: S_Transcript_71609.p1


Annotated TAIR IDAT3G10810.1
Annotated Gene Namezinc finger (C3HC4-type RING finger) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:3381848-3384227 | Reverse length=496
E-Value8.9E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.5479872281809
Replicate 22.5153017410848
Replicate 32.8835548274034
Condition 2: 8 Hour
Replicate 14.4456839749072
Replicate 22.914898845567
Replicate 33.1939055043295
Condition 3: 24 Hour
Replicate 11.6365873624875
Replicate 24.0602919762186
Replicate 32.6290078858753


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_71609.p1 GENE.S_Transcript_71609~~S_Transcript_71609.p1 ORF type:5prime_partial len:307 (+),score=100.87,zf-CCCH|PF00642.20|7.2e-06 S_Transcript_71609:1-921(+)
CCTCCACCACCTCCTCCACCGCCGCCACCAAAACCACCATCGCCACCTCCACAACCACCCCCACCACCACCTCAACAACCGCCATCAACACCACCTCAACAATCACCACCACCACCACCACCGCCACCACCTCAACAACAACCACCACCACCACCACCACAATCACCACCACCACCACCACCTCAACAACCACCACCACCACCACCACCACCACAATCACCACCACCACCACCACCTCAACAACCATCACCACCACCATCTCAACAACAACCACCAGCACCACTTCCTCAACAACCACCCCCACCCCCACCACCTCAACAACGGCCACCACCACCACCTTCCTCAATGAGTCTCAACTGCCCATCGAGTCCTATAGAAGAGGGAGAGGTAGATCCCACCTCTGTTTCAGTGCCTCACCCGGAACCAGTAGTTCCTAAAAGCCAACCTTCGCCACATACCAAAACATCAGCGGCTAACATAACATGGAAACAGGGGTCTGAAACGGCTAGTAGTGGGTGGGAACCACCAAGCCAGGAAAATTCAAAATTTTCTGGTACTGGTTCCATTTTGGGAAGTCCTAACATGCGTTGGAGTAATTCGAGTCAGGGGGTGGGTATTGGAGGTGCAAACATGCATTGGAGTACTTCGGTTGCAAGCCAGGGCACCCGAGCTAGTCAAACTTCACCGAGATATAGTCACAGTGTGGGGAGACATTCTGGTCCGAAGGACAGGAGTCACCACCATCACGGTGTAGATTCAGGTTTTGGTAAAAGTAGGCCAACAACATGGAACAGGCAGTCCTCATTTGGCGGAGGGGGAGGTTCAAGGCCCCCTCACAGTCACAGAGGGCAGCGTGTTTGTAAATTTTATGAGAGTGGGTATTGTAAGAAAGGTGCATCCTGTAAGTATTTGCACCCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_71609.p1 GENE.S_Transcript_71609~~S_Transcript_71609.p1 ORF type:5prime_partial len:307 (+),score=100.87,zf-CCCH|PF00642.20|7.2e-06 S_Transcript_71609:1-921(+)
PPPPPPPPPPKPPSPPPQPPPPPPQQPPSTPPQQSPPPPPPPPPQQQPPPPPPQSPPPPPPQQPPPPPPPPQSPPPPPPQQPSPPPSQQQPPAPLPQQPPPPPPPQQRPPPPPSSMSLNCPSSPIEEGEVDPTSVSVPHPEPVVPKSQPSPHTKTSAANITWKQGSETASSGWEPPSQENSKFSGTGSILGSPNMRWSNSSQGVGIGGANMHWSTSVASQGTRASQTSPRYSHSVGRHSGPKDRSHHHHGVDSGFGKSRPTTWNRQSSFGGGGGSRPPHSHRGQRVCKFYESGYCKKGASCKYLHP*

Click here to download the sequence:
Link to NCBI Protein BLAST