Transcript Information: S_Transcript_71624.p1


Annotated TAIR IDAT1G77360.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:29071983-29073536 | Reverse length=517
E-Value1E-50
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.2431061336952
Replicate 28.7732904784077
Replicate 38.5715400925459
Condition 2: 8 Hour
Replicate 17.9791309408065
Replicate 28.6709681808336
Replicate 37.0814393050106
Condition 3: 24 Hour
Replicate 19.3830372040136
Replicate 27.9855711930083
Replicate 39.0985562870805


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_71624.p1 GENE.S_Transcript_71624~~S_Transcript_71624.p1 ORF type:5prime_partial len:596 (+),score=105.43,PPR_2|PF13041.2|0.019,PPR_2|PF13041.2|0.13,PPR_2|PF13041.2|4.4e-06,PPR_2|PF13041.2|9.1e-05,PPR_2|PF13041.2|0.34,PPR_2|PF13041.2|0.074,PPR_2|PF13041.2|1.2e-09,PPR_2|PF13041.2|3e-08,PPR_2|PF13041.2|22,PPR_2|PF13041.2|0.23,PPR|PF01535.16|0.04,PPR|PF01535.16|3.8e+03,PPR|PF01535.16|0.04,PPR|PF01535.16|0.028,PPR|PF01535.16|2.6,PPR|PF01535.16|1.6,PPR|PF01535.16|52,PPR|PF01535.16|0.00027,PPR|PF01535.16|0.0024,PPR|PF01535.16|2.3,PPR|PF01535.16|88,PPR_3|PF13812.2|13,PPR_3|PF13812.2|1e+03,PPR_3|PF13812.2|13,PPR_3|PF13812.2|0.017,PPR_3|PF13812.2|1.4e+02,PPR_3|PF13812.2|0.035,PPR_3|PF13812.2|8.1e+02,PPR_3|PF13812.2|28,PPR_3|PF13812.2|0.07,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|2.4e+02,PPR_1|PF12854.3|5.6,PPR_1|PF12854.3|0.0058,PPR_1|PF12854.3|0.0006,PPR_1|PF12854.3|5.6e+02,PPR_1|PF12854.3|0.00074,PPR_1|PF12854.3|0.0076,PPR_1|PF12854.3|8.3e+02 S_Transcript_71624:3-1790(+)
TTTTGGAGATGGGTATATTATTTCGATGCATGTCTGGTCTTGAAACTTGAGATTTATGAAGTGTTAGCCAGTGCTAGTGGTTCATCTATCGAATTTTTTTTAGATGAAACTGGTTTAAGGGTATCTCAAGAAGACGTTGAGCATGTCCAAAAATTGTCATATAGGTACCCTTCAACTGCAATCAAAATTTTCAGGTGGGCTGGGTACCATTTGAATGATAGACATAGCCCTTATGCTTGGAATTTAATTATTGATATGTTGGGTAAGAATATTATGTTTGACTCTATGTGGGATGTTATTAAGTCTATGAAGAAAGAAAGGCTTCTTTCTCTGGCTACTTTTGCTTCTGTTTTTAGTAGTTATGTCACCAGTGGTCGTGTCGACTATGATCAAAGATTTGATCAAACATGTTTTTGGAGATGGGTATATTATTTCGATGCATGTCTGGTCTTGAAACTTGAGATTTATGAAGTGTTAGCCAGTGCTAGTGGTTCATCTATCGAATTTTTTTTAGATGAAACTGGTTTAAGGGTATCTCAAGAAGACGTTGAGCATGTCCAAAAATTGTCATATAGGTACCCTTCAACTGCAATCAAAATTTTCAGGTGGGCTGGGTACCATTTGAATGATAGACATAGCCCTTATGCTTGGAATTTAATTATTGATATGTTGGGTAAGAATATTATGTTTGACTCTATGTGGGATGTTATTAAGTCTATGAAGAAAGAAAGGCTTCTTTCTCTGGCTACTTTTGCTTCTGTTTTTAGTAGTTATGTCACCAGTGGTCGTGTCGACGAGGCATTCATGACCTTTGAGGTTATGGATCAGTATGGTATTCCTAGGGACATTGTCGCTTTGAACTCGCTCTTGAGTGCTATTTGTAGGGATGGAAGGACAGGGAGAGCGGACGAATTTTTGAGGCTTGCTAAGGATAAGATTAGACCGGATGCTGATACGTATGCCATCTTGTTGGAGGGTTGGGAGAGTGAGGGGAATGTAGATAGCGCTAGGCAGACCTTTGGGGAGATGGTGGTTGAAGTTGGATGGGATCCGAGGAATGTGCCTGCTTATGACTCGTTTTTGTGCGTGTTGATTAAGGGACCAAAAGGGTTTCATGAGGCCTTGAAGTTCTTGAATACCATGAAAGAAAGGAGGTGTTCACCCGGGATTAAGTTTTTTGGGTTTGCCTTGGAGGATTGTGTGAGGAAAACTGATGCTCGAGGAGCTGCTTTGCTGTGGGAAGCAATGACAGTGAGGAGCGAGTTTAGACCCAATAGGCACATGTATAATATGATGATTTCCTTACATTGCCAACTTTCTAACTTTGATATAGCTAGAAAGTATTTGGATGAGATGGTATGCTATGGAGTTCTTCCTGATACTCAGAGTTATAATACATTACTTCAATTCCTGCTTAAAAGCCGAAAGCTACGAGACGCGTCTTCTATTTTTACTGAGATGGTGAAGAATGAGTGTACTCCAAACCAAGCGAATTGCACAGCTGCAGTTCGACTTTACGTGGATTCTGGGGATCCTTACATGGCTATTAAGGTATGGAAATACATGGTCGAGAACTATGTTTCTGAATTGGAAGAAACTGGGAACTTTTTGGTCTGTGGCCTTCGTGACTGCAACAGAGTTCAAGAAGCTGTAAAATATGCTGAAGATATGATTGATCGCAGGATAAAGTTGAGCTCTTCTTCACTGACAAAATTGAAGCAGAGTCTGACTAAGGCAGGAAAGGCTTCTGTTTATGATGAATTGTTGAAAAAGTGGAAAATCCGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_71624.p1 GENE.S_Transcript_71624~~S_Transcript_71624.p1 ORF type:5prime_partial len:596 (+),score=105.43,PPR_2|PF13041.2|0.019,PPR_2|PF13041.2|0.13,PPR_2|PF13041.2|4.4e-06,PPR_2|PF13041.2|9.1e-05,PPR_2|PF13041.2|0.34,PPR_2|PF13041.2|0.074,PPR_2|PF13041.2|1.2e-09,PPR_2|PF13041.2|3e-08,PPR_2|PF13041.2|22,PPR_2|PF13041.2|0.23,PPR|PF01535.16|0.04,PPR|PF01535.16|3.8e+03,PPR|PF01535.16|0.04,PPR|PF01535.16|0.028,PPR|PF01535.16|2.6,PPR|PF01535.16|1.6,PPR|PF01535.16|52,PPR|PF01535.16|0.00027,PPR|PF01535.16|0.0024,PPR|PF01535.16|2.3,PPR|PF01535.16|88,PPR_3|PF13812.2|13,PPR_3|PF13812.2|1e+03,PPR_3|PF13812.2|13,PPR_3|PF13812.2|0.017,PPR_3|PF13812.2|1.4e+02,PPR_3|PF13812.2|0.035,PPR_3|PF13812.2|8.1e+02,PPR_3|PF13812.2|28,PPR_3|PF13812.2|0.07,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|2.4e+02,PPR_1|PF12854.3|5.6,PPR_1|PF12854.3|0.0058,PPR_1|PF12854.3|0.0006,PPR_1|PF12854.3|5.6e+02,PPR_1|PF12854.3|0.00074,PPR_1|PF12854.3|0.0076,PPR_1|PF12854.3|8.3e+02 S_Transcript_71624:3-1790(+)
FWRWVYYFDACLVLKLEIYEVLASASGSSIEFFLDETGLRVSQEDVEHVQKLSYRYPSTAIKIFRWAGYHLNDRHSPYAWNLIIDMLGKNIMFDSMWDVIKSMKKERLLSLATFASVFSSYVTSGRVDYDQRFDQTCFWRWVYYFDACLVLKLEIYEVLASASGSSIEFFLDETGLRVSQEDVEHVQKLSYRYPSTAIKIFRWAGYHLNDRHSPYAWNLIIDMLGKNIMFDSMWDVIKSMKKERLLSLATFASVFSSYVTSGRVDEAFMTFEVMDQYGIPRDIVALNSLLSAICRDGRTGRADEFLRLAKDKIRPDADTYAILLEGWESEGNVDSARQTFGEMVVEVGWDPRNVPAYDSFLCVLIKGPKGFHEALKFLNTMKERRCSPGIKFFGFALEDCVRKTDARGAALLWEAMTVRSEFRPNRHMYNMMISLHCQLSNFDIARKYLDEMVCYGVLPDTQSYNTLLQFLLKSRKLRDASSIFTEMVKNECTPNQANCTAAVRLYVDSGDPYMAIKVWKYMVENYVSELEETGNFLVCGLRDCNRVQEAVKYAEDMIDRRIKLSSSSLTKLKQSLTKAGKASVYDELLKKWKIR*

Click here to download the sequence:
Link to NCBI Protein BLAST