Transcript Information: S_Transcript_71680.p1


Annotated TAIR IDAT1G76280.3
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:28617948-28622581 | Reverse length=801
E-Value2E-253
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.9271129123048
Replicate 28.6007484715736
Replicate 37.6360965382462
Condition 2: 8 Hour
Replicate 19.0361823377682
Replicate 28.8837365058479
Replicate 39.0837510374739
Condition 3: 24 Hour
Replicate 18.0133168252422
Replicate 27.7924001061533
Replicate 37.1146929133076


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_71680.p1 GENE.S_Transcript_71680~~S_Transcript_71680.p1 ORF type:complete len:826 (+),score=143.09,PPR_2|PF13041.2|0.39,PPR_2|PF13041.2|1.7,PPR_2|PF13041.2|2e-06,PPR_2|PF13041.2|2.3e+02,PPR_2|PF13041.2|0.00094,PPR_2|PF13041.2|3.9e+02,PPR_2|PF13041.2|1.2e-11,PPR_2|PF13041.2|0.13,PPR_2|PF13041.2|1.1e-05,PPR_2|PF13041.2|2.6e-05,PPR_3|PF13812.2|3.9e+02,PPR_3|PF13812.2|1.1e+02,PPR_3|PF13812.2|1.7e+02,PPR_3|PF13812.2|2e+03,PPR_3|PF13812.2|3.4e+03,PPR_3|PF13812.2|0.005,PPR_3|PF13812.2|67,PPR_3|PF13812.2|0.84,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|0.23,PPR_3|PF13812.2|0.029,PPR_3|PF13812.2|27,PPR_3|PF13812.2|12,PPR_3|PF13812.2|1e+04,PPR|PF01535.16|0.031,PPR|PF01535.16|2.2e+02,PPR|PF01535.16|0.024,PPR|PF01535.16|1.3e+02,PPR|PF01535.16|2.4e+02,PPR|PF01535.16|6.3e+03,PPR|PF01535.16|0.67,PPR|PF01535.16|0.00045,PPR|PF01535.16|17,PPR|PF01535.16|6e+02,PPR|PF01535.16|5.3e+02,PPR_1|PF12854.3|0.059,PPR_1|PF12854.3|2.3e+03,PPR_1|PF12854.3|6.5e+02,PPR_1|PF12854.3|1.8e+03,PPR_1|PF12854.3|6.2e+03,PPR_1|PF12854.3|5e+03,PPR_1|PF12854.3|7.7e+02,PPR_1|PF12854.3|12,PPR_1|PF12854.3|0.0054,PPR_1|PF12854.3|10,PPR_1|PF12854.3|1.1e+02 S_Transcript_71680:441-2918(+)
ATGCATAGGACTATATTAAAATGCCATTGGAGAACTGTTCGAGGGTTTGTTTTTGGATCTGTGTTGCCGAAAAGGGGAAACATAATTGGACCTCACCTGGTGGAATCATTTCAAACTATTGCTGGCTCTACAGATCCTGTGAGTTTCAGCTACAGAGGAGAATTGGTTACCTTGGGTGTTCAAATTGTTCATGCTCTGCAGTTAGGTCATAGAAGCCGAGCATCTAGTCTACTTACGGAACTTGATGCTGCAAATCATGCAGTACAGATTGCAGATATCATCCGCATTCTTGACTACTGTGCTAGGTCTCCTGATCCATTGTTTGTGATGGAGACTTGGAGAGTCCTGGAACAAAAAAATATTCATTTGAATCATAAATGCTACATGCTTATGATTCGTGCACTTTGCAATGGTGGTTACATGGAGGAGGCAGTCCAGTTGGTGAAATTTCTTGGAGAACATCAACAAATCAGTTATATCCTACCTCTGTACAATTGTTTTCTGTCAGCCTGTACAAAAATGAAAGATACAATGCATTTTCATCAGTGCTTAGATTTGATGGAGAATGAATTATTGGGGAAAAATGAAGTAACATATGCAGTACTTCTCAAGCTTGCAGTTTGGCAGAAGAATCTGTCTGCAGTGCATGAAATCTGGAGAGAGTATAGCAAGTATTACAACTTGAACATTATTTCTTTGCGGAAGTTCATATGGTCTTTTACACGGTTGAAGGATCTGGAATCTGCATATAACACATTACAGTATCTGGTAGCTTTGGCTTTTAAAGAAGGCCCCCTTTTGTATAAAACTATGGAGGGGAAGATCTGCTGCCCACATCTGGACATTCCTATTCCATCACATCGGATGACTGTCATGGGATCTCATCTGTTCTATGGTCATGCCAGCCCAATGCTGAACAATGATGAAACAATGACAATGAACTCGAGTATGGCCCTGAATTGTCCTTTCAACGCAGAGGGTAACATAAGCAGGATCACTAGAAACACGCTTGAGGAGCATAAAGAGAGGTCTATCATGAAGTTGTTGAGGTGGTCTTTTAATGATGTCATACATGCATGTGCCCAATGTCGAAATAGTGAGCTAGCTGAACAATTGGTCATGCAGATGCGAAATCTTGGACTGGAACCATCATCCCATACATTTGACGGTTTGATCAGAGCAGTTATTCCAGGCAGAGGAATTGGCGACACCGTAGATATGTTAAAAGTGATGCACGGGAGAAAGTTGGAACCATATGATTCCACTCTTTCAACCCTTTCAGTAGGCTGTAGCAGAGCCTTGGACTTGGATTTAGCTGAAGCTTTGCTCAACCGGATTGCACAAGTTCCTCATGCTCATCCTTTTAATGCATTTTTTGCAGCATGTGATACTATGGAACAACCTGAACGTGCTATCAAGATGTTGGCCAGGATGAGACAGTTGAATATCAAGCCAGATGCCAGGACGTATGCGCTGTTATTTTCTTTGTTTGGGAATGTCAATGCCCCCTATGAAGAAGGTAATTTATTCTCACAGGCAGAGGTTTCTAAAAGGATCGAGGTCATAGAAATGGATATGCTCAATAATGGAATTCAGCACAGTCAACTGTCAATAAAGAACTTGTTGAAAGCCCTTGGGACAGAAGGGATGGTGCAGGAGCTGGTAAAATACATGCATGCAACAGAAAAACAGTTCTCCGACCACAACTTCATCGGAACTGATATCTACAATACAGTTCTGCATTCACTTGTTGAGGCTAAAGAGAATCATGTGGCAATTCAAATGTTCAGGAACATGAAACTTTGTGGGCTTCAGCCTGATGCTGCAACTTACAATATCATGATTGATGGATGTTCAAACATAAGATGTTTCAAGTCTGCTTGTGCTTTGGTTTCTATGATGTTGCGCGATGGCTTCCATCCTAAGACATTAACATATACTGCACTTATTAAGATTCTGCTGGATGATGATGCATTTGATGACGCTTTGAATCTTCTTGACCAAGCTATCTTTGAAGGCAATGAACCTGATGTACTATTGTACAATACGGTTCTTCGCAGAGCAGGTTTACAGGGAAGGTTCGATATCGTCGAGCTTGTGGTTGAGCTGATGAATCGAGAGAAAATCCAGCCAGATCCATCAACCTGTAGCTATGTATTCAATGCATATGTTGATCATCGATTCTTTGAAACTGCTGTTGAAGCCCTGCAAGTCTTGAGCATGAGAATGATCTCTAAAGATTGTGATACTCTTGAGGATGTGAGAAGGGAGTTTGAGGATCTCATTCTTGCTGATGAAACAGAAGCTGAGAAACAGATAATGCGGATTTTCAAACAGTCTGAGAACCTTGCTGCTGCTCTTCTTAATCTAAGATGGTGTTCTATAGCTGGATACTCAGTTTCATGGGTGCCCGATCAGAGTCCATGGGCAAAAAGGCTTGCTAGCTCTTATGATACGGAAATGGCGTATACCCACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_71680.p1 GENE.S_Transcript_71680~~S_Transcript_71680.p1 ORF type:complete len:826 (+),score=143.09,PPR_2|PF13041.2|0.39,PPR_2|PF13041.2|1.7,PPR_2|PF13041.2|2e-06,PPR_2|PF13041.2|2.3e+02,PPR_2|PF13041.2|0.00094,PPR_2|PF13041.2|3.9e+02,PPR_2|PF13041.2|1.2e-11,PPR_2|PF13041.2|0.13,PPR_2|PF13041.2|1.1e-05,PPR_2|PF13041.2|2.6e-05,PPR_3|PF13812.2|3.9e+02,PPR_3|PF13812.2|1.1e+02,PPR_3|PF13812.2|1.7e+02,PPR_3|PF13812.2|2e+03,PPR_3|PF13812.2|3.4e+03,PPR_3|PF13812.2|0.005,PPR_3|PF13812.2|67,PPR_3|PF13812.2|0.84,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|0.23,PPR_3|PF13812.2|0.029,PPR_3|PF13812.2|27,PPR_3|PF13812.2|12,PPR_3|PF13812.2|1e+04,PPR|PF01535.16|0.031,PPR|PF01535.16|2.2e+02,PPR|PF01535.16|0.024,PPR|PF01535.16|1.3e+02,PPR|PF01535.16|2.4e+02,PPR|PF01535.16|6.3e+03,PPR|PF01535.16|0.67,PPR|PF01535.16|0.00045,PPR|PF01535.16|17,PPR|PF01535.16|6e+02,PPR|PF01535.16|5.3e+02,PPR_1|PF12854.3|0.059,PPR_1|PF12854.3|2.3e+03,PPR_1|PF12854.3|6.5e+02,PPR_1|PF12854.3|1.8e+03,PPR_1|PF12854.3|6.2e+03,PPR_1|PF12854.3|5e+03,PPR_1|PF12854.3|7.7e+02,PPR_1|PF12854.3|12,PPR_1|PF12854.3|0.0054,PPR_1|PF12854.3|10,PPR_1|PF12854.3|1.1e+02 S_Transcript_71680:441-2918(+)
MHRTILKCHWRTVRGFVFGSVLPKRGNIIGPHLVESFQTIAGSTDPVSFSYRGELVTLGVQIVHALQLGHRSRASSLLTELDAANHAVQIADIIRILDYCARSPDPLFVMETWRVLEQKNIHLNHKCYMLMIRALCNGGYMEEAVQLVKFLGEHQQISYILPLYNCFLSACTKMKDTMHFHQCLDLMENELLGKNEVTYAVLLKLAVWQKNLSAVHEIWREYSKYYNLNIISLRKFIWSFTRLKDLESAYNTLQYLVALAFKEGPLLYKTMEGKICCPHLDIPIPSHRMTVMGSHLFYGHASPMLNNDETMTMNSSMALNCPFNAEGNISRITRNTLEEHKERSIMKLLRWSFNDVIHACAQCRNSELAEQLVMQMRNLGLEPSSHTFDGLIRAVIPGRGIGDTVDMLKVMHGRKLEPYDSTLSTLSVGCSRALDLDLAEALLNRIAQVPHAHPFNAFFAACDTMEQPERAIKMLARMRQLNIKPDARTYALLFSLFGNVNAPYEEGNLFSQAEVSKRIEVIEMDMLNNGIQHSQLSIKNLLKALGTEGMVQELVKYMHATEKQFSDHNFIGTDIYNTVLHSLVEAKENHVAIQMFRNMKLCGLQPDAATYNIMIDGCSNIRCFKSACALVSMMLRDGFHPKTLTYTALIKILLDDDAFDDALNLLDQAIFEGNEPDVLLYNTVLRRAGLQGRFDIVELVVELMNREKIQPDPSTCSYVFNAYVDHRFFETAVEALQVLSMRMISKDCDTLEDVRREFEDLILADETEAEKQIMRIFKQSENLAAALLNLRWCSIAGYSVSWVPDQSPWAKRLASSYDTEMAYTH*

Click here to download the sequence:
Link to NCBI Protein BLAST