Transcript Information: S_Transcript_71898.p1


Annotated TAIR IDAT5G40640.1
Annotated Gene Nameunknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27390.1); Has 104 Blast hits to 102 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:16277345-16280258 | Forward length=586
E-Value5.1E-266
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.382210604945
Replicate 211.367945805906
Replicate 310.565499654673
Condition 2: 8 Hour
Replicate 115.000062680695
Replicate 216.153233085633
Replicate 314.01787944192
Condition 3: 24 Hour
Replicate 111.551870591636
Replicate 211.485558748013
Replicate 39.6613254839936


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_71898.p1 GENE.S_Transcript_71898~~S_Transcript_71898.p1 ORF type:complete len:590 (+),score=89.16 S_Transcript_71898:462-2231(+)
ATGGAGCCTCCAAGTGGGGTTTGGGCTTCTTTATGGCAGTTTCTTCATTTTCTGCCGTACTTCATCGGTCTTCTTCTTCTGGGCACCATCAAAGGCATTATATTCTGCCCTTTGGTATGCCTAATCATGGCAGTGGGGAACTCTGCAGTCATCTTGGGTCTTTGGCCAGTACACTTTTTTTGGACATATTACTGCATTTTGAGAGCTAAGCAAGTAGGACCAGTTTTGAAGATTGTGATGTGTCCGTGCATATTTGTTCTATTGATACTTTGGCCAGTCATAGGAATTCTTGCCAGCATTATAGGGGGTGCGGCATATGGCTTCCTCTCACCCATATTCGCTACTTTTGAAGCTGTTGGAGAGGGCAAACCGAATAAATTTTCTCACTGTATCTATGATGGAACTTGGAGTACTATCCAGGGCTGCTTCACTGTTGTAAGAGATTTCACAGATGTTTGTTTTCATTCGTACTTCTCAATCATGGATGACCTGAGAGATCATGGTCCACCTGATGCAAAGTATTATGAAATCAGAATACTTTATCTACCTGGAGCACTTATAGCTGGAGTTCTTGGTGTTCTCATCGATGTGCCAGTCATTTTGCTTCTTGCCTTATTTAAGAGCCCTTATATGCTCCTCAAGGGGTGGAAGCGATTGCTACATGACTTGATAGGTCGTGAGGGCCCTTTCCTTGATACAATATGTGTCCCCTTTGCAGGTCTTGCTATTCTCCTCTGGCCATTGGCTGTTGTTGGGGCTGTATTAGGCTCCATGGTTTCAAGTGTCTTTCTAGGTGCTTATGCAGGGGTGATTGCTTATCAGGAGTCCTCCATTTTCATGGGGCTTCATTACATTGTAGCAGCTTTGGCCATATATGATGAATACAGCAACGATGTCCTTGACATGCCAGAAGGAACTTGTTTTCCAAGACCTATTTTCCGAAAAAAGGATGCATCACCACAGATTCGATCACGTCCACCATCTTTTTCGAGACCCAATTCCTTCCAGAAGATTCCATCTCGTAGTACTTCTCTAAAGAACCCTATGGTTGAATTGAAGCCACTTGAGCTATTAGATGGTTTATTCAAAGAGTGTCATCGCCATGGAGAAATACTCGTCTCTGGAGGACTAATATCAGTGACGGACATTGAAGATGCGAAATCGGGCAAAGATAGCTCTGGTGTCATAACCAGTGGTTTGCCTGCCTATTGCATCTTACAGATGCTTATACGTTCTGCAAAAGCTAATTCACCTGGTTTGTTGTTGAGTGATAACATTACAGAAATAACAAGCACAAATAGGCCAAAAGAGACATTTTATGATTGGTTTGTGAATCCACTTCTGATCATGAAAGAACAGATCATAGCAGAAAAGCTCTCACCGGTGGAGGAAGATTACCTTGGTAAATTGGTTTTGTTGACTGGAGATTCTGGGAGATTACAGAAATCATTCATAGGTAATCCACCTGAATCCGAGGTTAAAAGAGCAGAACTACAGGCACTGGCTCGAAGACTTCGAGGAATCACAAAATCCATATCCAGGTTTCCTACTTTCAGACGTCGTTTCGAATCTCTTACAAAATCCATGTTGGATAACTTGGCCAAGAAGAATAGCGGGAGCCAAGCAAGCAATGGAGGTAGCTCTGCGTCGAGGTCAAGAGGTGGCATAGTTCGGTTCTTGAGTGAAAGATCATTTAAACGCCAAAAAAGTGATGGGAGTTCTGACAGCGACTCTCGTAGTTATGTTGAGAAGGATGTGGAGATACAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_71898.p1 GENE.S_Transcript_71898~~S_Transcript_71898.p1 ORF type:complete len:590 (+),score=89.16 S_Transcript_71898:462-2231(+)
MEPPSGVWASLWQFLHFLPYFIGLLLLGTIKGIIFCPLVCLIMAVGNSAVILGLWPVHFFWTYYCILRAKQVGPVLKIVMCPCIFVLLILWPVIGILASIIGGAAYGFLSPIFATFEAVGEGKPNKFSHCIYDGTWSTIQGCFTVVRDFTDVCFHSYFSIMDDLRDHGPPDAKYYEIRILYLPGALIAGVLGVLIDVPVILLLALFKSPYMLLKGWKRLLHDLIGREGPFLDTICVPFAGLAILLWPLAVVGAVLGSMVSSVFLGAYAGVIAYQESSIFMGLHYIVAALAIYDEYSNDVLDMPEGTCFPRPIFRKKDASPQIRSRPPSFSRPNSFQKIPSRSTSLKNPMVELKPLELLDGLFKECHRHGEILVSGGLISVTDIEDAKSGKDSSGVITSGLPAYCILQMLIRSAKANSPGLLLSDNITEITSTNRPKETFYDWFVNPLLIMKEQIIAEKLSPVEEDYLGKLVLLTGDSGRLQKSFIGNPPESEVKRAELQALARRLRGITKSISRFPTFRRRFESLTKSMLDNLAKKNSGSQASNGGSSASRSRGGIVRFLSERSFKRQKSDGSSDSDSRSYVEKDVEIQ*

Click here to download the sequence:
Link to NCBI Protein BLAST