Transcript Information: S_Transcript_71903.p1


Annotated TAIR IDAT5G40640.1
Annotated Gene Nameunknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27390.1); Has 104 Blast hits to 102 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:16277345-16280258 | Forward length=586
E-Value7.6E-210
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.5849272722913
Replicate 23.8962983766031
Replicate 32.9720082430526
Condition 2: 8 Hour
Replicate 12.4479476743729
Replicate 23.5557905122744
Replicate 34.5172657176119
Condition 3: 24 Hour
Replicate 11.1091221198315
Replicate 23.0018293478606
Replicate 31.3362672532512


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_71903.p1 GENE.S_Transcript_71903~~S_Transcript_71903.p1 ORF type:complete len:453 (+),score=56.39 S_Transcript_71903:462-1820(+)
ATGGAGCCTCCAAGTGGGGTTTGGGCTTCTTTATGGCAGTTTCTTCATTTTCTGCCGTACTTCATCGGTCTTCTTCTTCTGGGCACCATCAAAGGCATTATATTCTGCCCTTTGGTATGCCTAATCATGGCAGTGGGGAACTCTGCAGTCATCTTGGGTCTTTGGCCAGTACACTTTTTTTGGACATATTACTGCATTTTGAGAGCTAAGCAAGTAGGACCAGTTTTGAAGATTGTGATGTGTCCGTGCATATTTGTTCTATTGATACTTTGGCCAGTCATAGGAATTCTTGCCAGCATTATAGGGGGTGCGGCATATGGCTTCCTCTCACCCATATTCGCTACTTTTGAAGCTGTTGGAGAGGGCAAACCGAATAAATTTTCTCACTGTATCTATGATGGAACTTGGAGTACTATCCAGGGCTGCTTCACTGTTGTAAGAGATTTCACAGATGTTTGTTTTCATTCGTACTTCTCAATCATGGATGACCTGAGAGATCATGGTCCACCTGATGCAAAGTATTATGAAATCAGAATACTTTATCTACCTGGAGCACTTATAGCTGGAGTTCTTGGTGTTCTCATCGATGTGCCAGTCATTTTGCTTCTTGCCTTATTTAAGAGCCCTTATATGCTCCTCAAGGGGTGGAAGCGGTTGCTACATGACTTGATAGGTCGCGAGGGCCCTTTCCTTGATACAATATGTGTCCCCTTTGCAGGTCTTGCTATTCTCCTCTGGCCATTGGCTGTTGTTGGGGCTGTATTAGGCTCCATGGTTTCAAGTGTCTTTCTAGGTGCTTATGCAGGGGTGATTGCTTATCAGGAGTCCTCCATTTTCATGGGGCTTCATTACATTGTAGCAGCTTTGGCCATATATGATGAATACAGCAACGATGTCCTTGACATGCCAGAAGGAACTTGTTTTCCAAGACCTATTTTCCGAAAAAAGGATGCATCACCACAGATTCGATCACGTCCACCATCTTTTTCGAGACCCAATTCCTTCCAGAAGATTCCATCTCGTAGTACTTCTCTAAAGAACCCTATGGTTGAATTGAAGCCACTTGAGCTATTAGATGGTTTATTCAAAGAGTGTCATCGCCATGGAGAAATACTCGTCTCTGGAGGACTAATATCAGTGACCGACATTGAAGATGCGAAATCTGGCAAAGATAGCTGTTGTGTCATAACCATTGGTTTGCCTGCCTATTGTATCTTACAGATGCTTATACGTTCTGCAAAAGCTAATTCACCTGGTTTGTTGTTGAGTAAGTGGAACTTTTGTTCATGTTCTCACTTTTGGTTTTTCAAAGAACTGGGAATTGAAAAGCAACTTTTTATGTTTATTATTCTGGAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_71903.p1 GENE.S_Transcript_71903~~S_Transcript_71903.p1 ORF type:complete len:453 (+),score=56.39 S_Transcript_71903:462-1820(+)
MEPPSGVWASLWQFLHFLPYFIGLLLLGTIKGIIFCPLVCLIMAVGNSAVILGLWPVHFFWTYYCILRAKQVGPVLKIVMCPCIFVLLILWPVIGILASIIGGAAYGFLSPIFATFEAVGEGKPNKFSHCIYDGTWSTIQGCFTVVRDFTDVCFHSYFSIMDDLRDHGPPDAKYYEIRILYLPGALIAGVLGVLIDVPVILLLALFKSPYMLLKGWKRLLHDLIGREGPFLDTICVPFAGLAILLWPLAVVGAVLGSMVSSVFLGAYAGVIAYQESSIFMGLHYIVAALAIYDEYSNDVLDMPEGTCFPRPIFRKKDASPQIRSRPPSFSRPNSFQKIPSRSTSLKNPMVELKPLELLDGLFKECHRHGEILVSGGLISVTDIEDAKSGKDSCCVITIGLPAYCILQMLIRSAKANSPGLLLSKWNFCSCSHFWFFKELGIEKQLFMFIILE*

Click here to download the sequence:
Link to NCBI Protein BLAST