Transcript Information: S_Transcript_72096.p1


Annotated TAIR IDAT2G19710.1
Annotated Gene NameRegulator of Vps4 activity in the MVB pathway protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:8506339-8509817 | Forward length=937
E-Value3E-81
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.0943078823355
Replicate 25.6424316950288
Replicate 35.0114128019374
Condition 2: 8 Hour
Replicate 14.6442907983367
Replicate 25.4085787920218
Replicate 34.6635071183725
Condition 3: 24 Hour
Replicate 15.1065961406584
Replicate 23.8263577986041
Replicate 34.2330703896698


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_72096.p1 GENE.S_Transcript_72096~~S_Transcript_72096.p1 ORF type:complete len:1001 (+),score=264.41,Ist1|PF03398.10|1.8e-61 S_Transcript_72096:249-3251(+)
ATGCTTCACAGGAGCTTCAAACCCGCCAAATGTAAAACGGCGTTGAATCTAGCCAAGTCGAGGATTAAGCTGATGAAGAATAAGAAGGATATACAAGTCAAACAGTTGAGGAGAGAATTAGCTCACTTACTTGACTCTGGTCAGGATCAAACTGCTCGTATTCGGGTTGAACATGTTGTGAGGGAGGAGAAACTAATGGATGCATACGAGCTTATTGAGTTATATTGTGAACTTATTGTTGCACGGTTGCCAATCATTGAGTCACAAAAGAATTGTCCCCTTGACTTGAAAGAAGCAATTACGAGCCTAATATTTGCAGCTCCAAGGTGCGGAGACATTCCAGAGCTCCAGGATGTCCGCAAGCATTTCACTGCAAAGTATGGGAAAGAGTTTGTTGCTGCAGCCATTGAGCTCCGCCCACAATGTGGAGTAAGCAGGAGTATGGTGGAGAAGTTATCTGTGAAAGCACCAGATGGTCCAACAAAAGTGAAAATCCTGACTGCTATTGCAGAAGAACATAATATCAAGTGGGAGCCAAAATGGTTTAAGGATGAAGATCCAATGCCCTCAGCTGACATTCAGAAGGTAGAACATGTAGAGCAGCCGGGCAAGATACAAATGGAGCCCCTAAATTTTGATATTGGAGATAGCATCCAGCAACCACATGCTCATGATGCAGCAAGATCAGCAAGTCCATCTCAAAGTAATGCCCATGTAAATGAGGTTCCAACATCTGTGACTTCTCGTCGCAATGCTAGAGCTGGAAGTTCGTCAGAGCAAGTGGTGTTTAGTCAGTCTTCTGGGATGGGTGAGAATGCTTTCCCTGTGAGTAACCCAAAATGGAACATGGAATTCGAGGATGCTGCTGCTGCTGCACATGCTGCTGCTGCACATGCTGCTGCTGAATCTGCAGAGCGAGCAAGTATGGCTGCAAGAGCTGCTGCAGAACTTTCCACCCGTAGCAAGATGACTAGTGATGATTCTTCTGGACCCTCAAATTCATCTGCGCATGGCTGGAGTGTGGGTGGCAAAGTCCATACAGGAAGTGTCTTGCATCAGAAAAATGCAGAGAGAAATTCTGCAAATAGCTCATTTAATCAAAAAAGTCCAAGAGTGCAAAATGCAAATGAGAGACATCACATGACAGAAGGTGCTGAGGACAAAACTTTAAAAGAAGATTACACTGAATCTGGAGTACAATATGGGAATAGAGAAGAAAGTGGAATTAGCTCCTATCCTGTACATCAAGATATGGGAAGACAATCAAGGGATTCTTTCTCGGCTCGGAGAACTTCTGAAGCTGAATCTAAGGTGTTTGATTCTTCAAACCACCAGGAGTATGGAAATGAGCCTTCTGAGAACCCTTTCTATCAAGAGCCTGTGGAAATGGAAAGGCCACCTAGCAGTTTCCAATCTGATTCTGGTTCTCTTGGCGATGAGTATGGTGTTTTTTCAAATTTGAATCACCAAAATGTGAAATATGATTCAGACGATGGCTCTTATGATAGTTTCAATCAAGGAACTGGAAGTAATGATGTTTGGCATCCGAAAACAACTTATCCTTCAGGCTTTTATGAGGTTAAGGAAGATGCAAGTCTCAATGAACAAGGAGGTAGAATTAGAGTTGTGGGATCTGGATATGGTTTTGACTCTGGTAGGGATATTTTTGTCAAAGCAGATCATAGGTCAGATGAGATGGATGTTAACAAAATAGGTGCTCAGACTGACAGTGCTGTGGTTTTTGATGACTCTTGTTCTGATGATGATGAATGCATCTTGGATGCTCCACTCAAGTCACATGATTTTCCTTTACCTGGTAAATCTTCTGCCAACCAATTCGCCTTTCCCCAAAAGAATTCCCCTAGAAATTTGGCCAGCCAATCATCTTTTTCCTCTCATTCTCACCATGGACTTGATATTTCTGAAAGTTTCCGAGAATCCCCCATCTACTCAAAATTAATTCAGCCACTGCCAGTATCTTATGATTCAGATGGGGCAAGTTCTGGGACTGAGACAGAGCTCCATCATGAGAAAACTGGTCCGCTAATTCACAGCAATGATTATAGGGAGCCTGAAACCAACCCTGTATCGAATAATGAGCCTCAGAAATCACAAGATCCTGGTTCACAGTTTCAGTATGAAAGCCCACCTAGTCCGGAAGGTGGTATGACATTGAATTTTGGAATGTTGCCTACTGGCCGACGGAATAGGTCCAATTGGCGCCCGCCATACGTGAGAGGTGCATTGAGTGCTGATTCATCTTCTGAAACATATTCCAAGGTGGCTGTAGATGATGCTGTTGGTGCCAGTCAAGAAACTTCTTCCGCTCTCCACTACCAAGTTTCGTCCAAGGAAATGGAGAAAACAGTTCCTAGAGAGACGAGTGAGCTTCATGCACGTATCAACTCGACGAACGATGATGAGGTGGTTTTTACACCTAAAGGTCCAGACACTCGTCAAATGCCATATACTGCAATAACTCATGAGTTTGCTCATGCAACAAGATCAAAAGATCTAACGGGATCTTTTGATTCTGAAGACAGCAGTTCTGAAGAGGATGCCCCCAAACAACCTGTAATTCGCAAAACACCTCCAGGTGCTGGACTTTCTCGGAGAACTAAGGTTTCGAATCCAAGATTAGTCGCACGAACTCAGCCATCTATCATGACAGATAATGTTGGTGAGGCAGAACGTCCTTCAAGTTCAGATGCTACTCAAGTTTCTCCCAAACTGCAGGCTGATTACACAAGCTTCGGGTCAACTTTTAGGCCAAGGCCACAAACAAAAGCTTGGAAGGAGAATAATGAGAGCTTATCTTCCTCAGCTGTGGAAGAAGGAACTAGTCCTGCAAGACGGACAGAGATACCAAGAGCATCAAATTCGATTGAAAAGGCTCCTTCAAGAGAAAACTCTACCAAAACTCCGAGTCATGTTCATCCCAAGCTCCCAGATTTTGAAACGTTAACAACCCAATTGCAGTCTTTACGTGCAAATCGTCGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_72096.p1 GENE.S_Transcript_72096~~S_Transcript_72096.p1 ORF type:complete len:1001 (+),score=264.41,Ist1|PF03398.10|1.8e-61 S_Transcript_72096:249-3251(+)
MLHRSFKPAKCKTALNLAKSRIKLMKNKKDIQVKQLRRELAHLLDSGQDQTARIRVEHVVREEKLMDAYELIELYCELIVARLPIIESQKNCPLDLKEAITSLIFAAPRCGDIPELQDVRKHFTAKYGKEFVAAAIELRPQCGVSRSMVEKLSVKAPDGPTKVKILTAIAEEHNIKWEPKWFKDEDPMPSADIQKVEHVEQPGKIQMEPLNFDIGDSIQQPHAHDAARSASPSQSNAHVNEVPTSVTSRRNARAGSSSEQVVFSQSSGMGENAFPVSNPKWNMEFEDAAAAAHAAAAHAAAESAERASMAARAAAELSTRSKMTSDDSSGPSNSSAHGWSVGGKVHTGSVLHQKNAERNSANSSFNQKSPRVQNANERHHMTEGAEDKTLKEDYTESGVQYGNREESGISSYPVHQDMGRQSRDSFSARRTSEAESKVFDSSNHQEYGNEPSENPFYQEPVEMERPPSSFQSDSGSLGDEYGVFSNLNHQNVKYDSDDGSYDSFNQGTGSNDVWHPKTTYPSGFYEVKEDASLNEQGGRIRVVGSGYGFDSGRDIFVKADHRSDEMDVNKIGAQTDSAVVFDDSCSDDDECILDAPLKSHDFPLPGKSSANQFAFPQKNSPRNLASQSSFSSHSHHGLDISESFRESPIYSKLIQPLPVSYDSDGASSGTETELHHEKTGPLIHSNDYREPETNPVSNNEPQKSQDPGSQFQYESPPSPEGGMTLNFGMLPTGRRNRSNWRPPYVRGALSADSSSETYSKVAVDDAVGASQETSSALHYQVSSKEMEKTVPRETSELHARINSTNDDEVVFTPKGPDTRQMPYTAITHEFAHATRSKDLTGSFDSEDSSSEEDAPKQPVIRKTPPGAGLSRRTKVSNPRLVARTQPSIMTDNVGEAERPSSSDATQVSPKLQADYTSFGSTFRPRPQTKAWKENNESLSSSAVEEGTSPARRTEIPRASNSIEKAPSRENSTKTPSHVHPKLPDFETLTTQLQSLRANRR*

Click here to download the sequence:
Link to NCBI Protein BLAST