Transcript Information: S_Transcript_72156.p1


Annotated TAIR IDAT1G67960.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Membrane protein,Tapt1/CMV receptor (InterPro:IPR008010); Has 447 Blast hits to 428 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 190; Fungi - 133; Plants - 49; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:25480808-25484176 | Reverse length=624
E-Value2E-71
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.008528395108
Replicate 21.843521499415
Replicate 32.8335200990977
Condition 2: 8 Hour
Replicate 14.0811393868368
Replicate 24.1608020381163
Replicate 33.3898517754553
Condition 3: 24 Hour
Replicate 12.8851732912105
Replicate 23.1155104862364
Replicate 33.2632294648129


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_72156.p1 GENE.S_Transcript_72156~~S_Transcript_72156.p1 ORF type:complete len:371 (+),score=70.76,DUF747|PF05346.7|1.2e-22 S_Transcript_72156:148-1260(+)
ATGATGGGGTTGAGATCCAAAGGAAAGCAACTCTCATTTGAGATCCTCACCTCTCCTTCCGCCGCTTCAGTCAACGGCACCGCTGACTGGGCCACCACCTCCGACAACGACAAGCAGCAGCCTTTTAATCGCAATCGTCGTAAACGCAAGCATAAGAAACCCAAGAAGAACCACAACAATAACAACAACCCAATCAATCCCATTCTCGAGGATGATGATGATGATGATCGCGTTCAGTCCACTTCTCAGAGTTTCGTGCAACAGGAGAGTGGTGTCGGTACAGTTTGTCAGGTCTTGTATGGCGGTGAATTGCGGCAGAGAACTCTTAATGGTGTGGTTTCCGAAGAATCACAGTCACAGTTGCCGCCGGTCGTAGAAGATGAAAAGGAAAGAGAAAAAGAACATTCAAGAGAGGAGGTAATTTCGAGACCTAATCAAAATACTAATGGCAGGTTGGAGACTGCTGAGTCCTTAGATTGGAAACGCTTCACGGCAGATGATGCTACCTATCCTTTGCCCATGGAGAATTCACCGATAAAGTACTTCATGGAAGAAATTGATAGTGGATATGCACTAAGGAGCACAACAACACTGGGGAATGAGAAAGAACGAGAGAGAGTCTATGATACTATCTTCCGCTTGCCTTGGAGGTGTGAGCTGCTTATTGATGTTGGCTTCTTCGTCTGTTTCAATTCATTTTTATCATTGCTAACAATCATTCCAATGAGAGCTCTAAGGACATTAGGGAGATTCTTCACTGGAAGGCAGCTCAAAAAGCCTTCTTCTGCGGAGCTGTCAGATATTGGGTGCCTCATGGTACTTGCTGGTGGAGTGATGCTTTTGGAGCTTACAGATATCAGCCTTATATATCATATGATCCGCGGTCAAGGAACTATCAAGCTTTATGTTGTCTACAATGTTTTAGAGATTTTTGATAAACTATGGCAAAGTTCCGGTGGTGATGTTTTCCAGACTTTATTTAATTCTGCTGAGGGGCTTGCATGCTGTTCACCGGATTCGTCAAGATATTGGATTCAAAGATACATCAGTGATTTATTGCTGGCAGCGGCTGTCTCAAATATCCTTAGTAGTTTATGTGTTGCTCAGGAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_72156.p1 GENE.S_Transcript_72156~~S_Transcript_72156.p1 ORF type:complete len:371 (+),score=70.76,DUF747|PF05346.7|1.2e-22 S_Transcript_72156:148-1260(+)
MMGLRSKGKQLSFEILTSPSAASVNGTADWATTSDNDKQQPFNRNRRKRKHKKPKKNHNNNNNPINPILEDDDDDDRVQSTSQSFVQQESGVGTVCQVLYGGELRQRTLNGVVSEESQSQLPPVVEDEKEREKEHSREEVISRPNQNTNGRLETAESLDWKRFTADDATYPLPMENSPIKYFMEEIDSGYALRSTTTLGNEKERERVYDTIFRLPWRCELLIDVGFFVCFNSFLSLLTIIPMRALRTLGRFFTGRQLKKPSSAELSDIGCLMVLAGGVMLLELTDISLIYHMIRGQGTIKLYVVYNVLEIFDKLWQSSGGDVFQTLFNSAEGLACCSPDSSRYWIQRYISDLLLAAAVSNILSSLCVAQE*

Click here to download the sequence:
Link to NCBI Protein BLAST