Transcript Information: S_Transcript_72156.p2


Annotated TAIR IDAT1G67960.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Membrane protein,Tapt1/CMV receptor (InterPro:IPR008010); Has 447 Blast hits to 428 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 190; Fungi - 133; Plants - 49; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:25480808-25484176 | Reverse length=624
E-Value1.3E-119
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.3475417561584
Replicate 27.4758212550257
Replicate 37.3161267108498
Condition 2: 8 Hour
Replicate 111.015180948932
Replicate 210.169022108967
Replicate 310.922169847181
Condition 3: 24 Hour
Replicate 19.6586881549321
Replicate 28.3350381417145
Replicate 38.754759214999


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_72156.p2 GENE.S_Transcript_72156~~S_Transcript_72156.p2 ORF type:complete len:242 (+),score=26.65,DUF747|PF05346.7|3.1e-57 S_Transcript_72156:1242-1967(+)
ATGTGTTGCTCAGGAATAAAAATTTCAGTATTCTTGGCTTGCAGGGTTCCTTCACTCCTGTTCTTACTTGTTCATTCTTTTATATTATTAGCTCAGGCAATTACCTTGTCAACTTGTATAGTTGCTCACAATAATGCTTTACTGGCTCTTCTGGTCTCAAATAATTTTGCGGAGATAAAAAGCAATGTGTTTAAGAGATTCAGCAAGGATAATGTCCACAGCATTGTATATTCTGATTCGATTGAGAGGTTCCATATTACAGCATTTGTGTCATTTGTTTTAGCCCAAAATATTCTGGAGGCTGAGGGTCCTTGGTTCGGAAATTTTCTTTCAAATGCTCTCCTTGTTTATTTTTCTGAAGTGGGAATTGATATCATCAAACATTCATTTATTGCGAAATTTAACGACATAAAGCCAGTGACATACTCTGAGTTTCTTGAAGACCTTTGCAAACAGACTCTGAACATTCAGACTGATGGAGCAAAAAGAAATCTCACTTTTGTTCCTGTGGCCCCAGCATGTGTGGTCATCAGGGTGCTAACCCCCATATACACTGCACGTCTTCCCTGTGGTCCCCTGCTTTGGAGGCTTTTCTGGATAATTATTTTGACAACATTGACTTACGTGATGCTTGCGAGCCTGAAGGTGATGATAGGAATGGGGCTTCAAAAGCACGCAGCTTGGTACATTAGAAGATGTGAAAAGAGGAAACTTCACTCTGACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_72156.p2 GENE.S_Transcript_72156~~S_Transcript_72156.p2 ORF type:complete len:242 (+),score=26.65,DUF747|PF05346.7|3.1e-57 S_Transcript_72156:1242-1967(+)
MCCSGIKISVFLACRVPSLLFLLVHSFILLAQAITLSTCIVAHNNALLALLVSNNFAEIKSNVFKRFSKDNVHSIVYSDSIERFHITAFVSFVLAQNILEAEGPWFGNFLSNALLVYFSEVGIDIIKHSFIAKFNDIKPVTYSEFLEDLCKQTLNIQTDGAKRNLTFVPVAPACVVIRVLTPIYTARLPCGPLLWRLFWIIILTTLTYVMLASLKVMIGMGLQKHAAWYIRRCEKRKLHSD*

Click here to download the sequence:
Link to NCBI Protein BLAST