Transcript Information: S_Transcript_72159.p1


Annotated TAIR IDAT1G67960.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Membrane protein,Tapt1/CMV receptor (InterPro:IPR008010); Has 447 Blast hits to 428 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 190; Fungi - 133; Plants - 49; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:25480808-25484176 | Reverse length=624
E-Value4.7E-216
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.2039144782343
Replicate 24.3898517815981
Replicate 34.3971532000351
Condition 2: 8 Hour
Replicate 18.3033680994669
Replicate 29.9387800989523
Replicate 37.3490315070347
Condition 3: 24 Hour
Replicate 16.8944400725031
Replicate 24.9759311865737
Replicate 36.6191643121488


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_72159.p1 GENE.S_Transcript_72159~~S_Transcript_72159.p1 ORF type:complete len:583 (+),score=87.30,DUF747|PF05346.7|7.2e-86 S_Transcript_72159:172-1920(+)
ATGATGGGGTTGAGATCCAAAGGAAAGCAACTCTCATTTGAGATCCTCACCTCTCCTTCCGCCGCTTCAGTCAACGGCACCACTGACTGGACCACCACCTCCGACGACGACAAGCAGCAACCTTTTAATCGCAATCGTCGTAAACGCAAGCATAAGAAACCCAAGAAGAACGACAACAATAACAACCCAATCAATCCCATTATCGAGGATGATGATGATGATCGCGTTCAGTCCACGTCTCAGAGTTGCGCTCAGAGTTTCGTGCAACAGGAGAGTGGTGTCGGTACAGTTTGTCAGGTCTTGTATGGCGGTGAATTGCGGCAGAGAACTCTTAATGGTGTGGTTTCCGAAGAATCAAAGTCACAGTCACAGTTACCGCCGGTCATAGAAAATGAAAAGGAAAGGGAAAAAGAACATTCAAGAGAGGAGGTAATTTCGAGACCTAATCAAAATACTAATGGCAGGTTGGAGACTGCTGAGTCCTTAGATTGGAAACGCTTCACGGCAGATGATGCTACCTATCCTTTGCCCATGGAGAATTCACCGATAAAGTACTTCATGGAAGAAATTGATAGTGGATATGCACTAAGGAGCACAACAACACTGGGGAATGAGAAAGAACGAGAGAGAGTCTATGATACTATCTTCCGCTTGCCTTGGAGGTGTGAGCTGCTTATTGATGTTGGCTTCTTCGTCTGTTTCAATTCATTTTTATCATTGCTAACAATCATTCCAATGAGAGCTCTAATGACATTATGGAGATTCTTCACCGGAAGGCAGCTCAAAAAGCCTTCTTCTGCGGAGCTGTCAGATATTGGGTGCCTCATGGTACTTGCTGGTGGAGTGATGCTTTTGGAGCTTACAGATATCAGCCTTATATATCATATGATCCGCGGTCAAGGAACTATCAAGCTTTATGTTGTCTACAATGTTTTAGAGATTTTTGATAAACTATGGCAAAGTTCCGGTGGTGATGTTTTCCAGACTTTATTTAATTCTGCTGAGGGGCTTGCATGCTGTTCACCGGATTCGTCAAGATATTGGATTCAAAGATACATCAGTGATTTATTGCTGGCAGCGGCTGTCTCAATTGTTCATTCTTTTATATTATTAGCTCAGGCAATTACCTTGTCAACTTGTATAGTTGCTCACAATAATGCTTTACTGGCTCTTCTGGTCTCAAATAATTTTGCGGAGATAAAAAGCAATGTGTTTAAGAGATTCAGCAAGGATAATGTCCACAGCATTGTATATTCTGATTCGATTGAGAGGTTCCATATTACAGCATTTGTGTCATTTGTTTTAGCCCAAAATATTCTGGAGGCTGAGGGTCCTTGGTTCGGAAATTTTCTTTCAAATGCTCTCCTTGTTTATTTTTCTGAAGTGGGAATTGATATCATCAAACATTCATTTATTGCGAAATTTAACGACATAAAGCCAGTGACATACTCTGAGTTTCTTGAAGACCTTTGCAAACAGACTCTGAACATTCAGACTGATGGAGCAAAAAGAAATCTCACTTTTGTTCCTGTGGCCCCAGCATGTGTGGTCATCAGGGTGCTAACCCCCATATACACTGCACGTCTTCCCTGTGGTCCCCTGCTTTGGAGGCTTTTCTGGATAATTATTTTGACAACATTGACTTACGTGATGCTTGCGAGCCTGAAGGTGATGATAGGAATGGGGCTTCAAAAGCACGCAGCTTGGTACATTAGAAGATGTGAAAAGAGGAAACTTCACTCTGACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_72159.p1 GENE.S_Transcript_72159~~S_Transcript_72159.p1 ORF type:complete len:583 (+),score=87.30,DUF747|PF05346.7|7.2e-86 S_Transcript_72159:172-1920(+)
MMGLRSKGKQLSFEILTSPSAASVNGTTDWTTTSDDDKQQPFNRNRRKRKHKKPKKNDNNNNPINPIIEDDDDDRVQSTSQSCAQSFVQQESGVGTVCQVLYGGELRQRTLNGVVSEESKSQSQLPPVIENEKEREKEHSREEVISRPNQNTNGRLETAESLDWKRFTADDATYPLPMENSPIKYFMEEIDSGYALRSTTTLGNEKERERVYDTIFRLPWRCELLIDVGFFVCFNSFLSLLTIIPMRALMTLWRFFTGRQLKKPSSAELSDIGCLMVLAGGVMLLELTDISLIYHMIRGQGTIKLYVVYNVLEIFDKLWQSSGGDVFQTLFNSAEGLACCSPDSSRYWIQRYISDLLLAAAVSIVHSFILLAQAITLSTCIVAHNNALLALLVSNNFAEIKSNVFKRFSKDNVHSIVYSDSIERFHITAFVSFVLAQNILEAEGPWFGNFLSNALLVYFSEVGIDIIKHSFIAKFNDIKPVTYSEFLEDLCKQTLNIQTDGAKRNLTFVPVAPACVVIRVLTPIYTARLPCGPLLWRLFWIIILTTLTYVMLASLKVMIGMGLQKHAAWYIRRCEKRKLHSD*

Click here to download the sequence:
Link to NCBI Protein BLAST