Transcript Information: S_Transcript_72220.p1


Annotated TAIR IDAT1G11890.1
Annotated Gene NameSynaptobrevin family protein
Annotated Gene Symbol(s)SEC22, ATSEC22
Annotation TypeOrtholog
Chromosome Positionchr1:4011509-4012835 | Forward length=218
E-Value1.5E-70
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.978560834433
Replicate 215.983265323888
Replicate 315.082059730589
Condition 2: 8 Hour
Replicate 122.936642029983
Replicate 220.780961625346
Replicate 323.873749317579
Condition 3: 24 Hour
Replicate 116.89337656606
Replicate 218.73541756978
Replicate 319.841341598691


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_72220.p1 GENE.S_Transcript_72220~~S_Transcript_72220.p1 ORF type:complete len:225 (+),score=21.44,Longin|PF13774.2|6.2e-24 S_Transcript_72220:79-753(+)
ATGTTTCGGTTCATACATCTTTCAACACAAATCAACCACGTTTCTACTTTCCAGTACTATTTTGCGCTAGATCGTTTCAAATTCAAGATTAGGGATTTGCCAAGATCAATCCCTAAGTTTCAATTTCGATTCCAGTGGAGAGATTGCATAGTAGAGATGGTGAAGGTGACTATGCTTGCTCGTGTGACCGATGGTCTTCCGTTGGCGGAGGGGTTGGATGATGGTCGTGATGTGGCTGATGTTGATTATTACAAGCAACAAATTAAAGCTTTGTTCAAGAATCTCTCCAAGGGCCAGAATGATCCATCGAGAATGTCCATTGAGAGTGGACCTTATGTGTTTCATTATATTATTGAGGGGCGTGTTTGTTATCTGACAATGTGTGATCGTGCTTATCCAAAGAAGCTTGCATTTCAATACTTGGAAGAACTTAAAAATGAATTTGAGCGTGTTAATGGGAATCAGATTGAAACTGCTGCTAGACCATATGCGTTTATTAAGTTTGGTAGGTGGTCACTATGTTTGTATTTTTGTTTGCCTCTTCAAGTATTTTTGATATTTAACGCTTCTGTTGAATTCTTTTTTTTTTTCTTCTTTTTTTTAAAGATACCTTCATACAGAAAACAAAGAAATTGTATCAGGACACCCGCACTCAAAGGAACATTTCCAAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_72220.p1 GENE.S_Transcript_72220~~S_Transcript_72220.p1 ORF type:complete len:225 (+),score=21.44,Longin|PF13774.2|6.2e-24 S_Transcript_72220:79-753(+)
MFRFIHLSTQINHVSTFQYYFALDRFKFKIRDLPRSIPKFQFRFQWRDCIVEMVKVTMLARVTDGLPLAEGLDDGRDVADVDYYKQQIKALFKNLSKGQNDPSRMSIESGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEELKNEFERVNGNQIETAARPYAFIKFGRWSLCLYFCLPLQVFLIFNASVEFFFFFFFFLKIPSYRKQRNCIRTPALKGTFPN*

Click here to download the sequence:
Link to NCBI Protein BLAST