Transcript Information: S_Transcript_72231.p1


Annotated TAIR IDAT1G11890.1
Annotated Gene NameSynaptobrevin family protein
Annotated Gene Symbol(s)SEC22, ATSEC22
Annotation TypeOrtholog
Chromosome Positionchr1:4011509-4012835 | Forward length=218
E-Value7.6E-145
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 127.914081295567
Replicate 225.298665359284
Replicate 321.803412436612
Condition 2: 8 Hour
Replicate 129.097310343822
Replicate 228.337674943654
Replicate 329.842186646974
Condition 3: 24 Hour
Replicate 122.815767201287
Replicate 225.68565311986
Replicate 323.87686870351


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_72231.p1 GENE.S_Transcript_72231~~S_Transcript_72231.p1 ORF type:5prime_partial len:225 (-),score=50.59,Longin|PF13774.2|2.2e-24,Synaptobrevin|PF00957.17|1.7e-19 S_Transcript_72231:408-1082(-)
AAAGATTGCATTGTAGAGATGGTGAAGGTGACTATGCTTGCTCGTGTGACCGATGGTCTTCCGTTGGCTGAGGGCTTGGATGATGGTCGTGATGTGGCTGATGTTGATTATTACAAGCAACAAATTAAAGCTTTGTTCAAGAATCTCTCCAAGGGCCAGAATGATCCATCGAGAATGTCCATTGAGAGTGGACCTTATGTGTTTCATTATATTATTGAGGGGCGTGTTTGTTATCTGACAATGTGTGATCGTGCTTATCCAAAGAAGCTTGCATTTCAATACTTGGAAGAACTTAAAAATGAATTTGAGCGTGTTAATGGGAATCAGATTGAAACTGCTGCCAGACCATATGCGTTTATTAAGTTTGATACCTTCATACAGAAAACAAAGAAATTGTATCAGGACACCCGTACTCAAAGGAACATTTCCAAATTGAATGATGAGCTGTATGAAGTCCATCAAATAATGACCCGAAATGTCCAAGAGGTTCTTGGTGTTGGTGAAAAGTTGGACCAGGTCAGCCAAATGTCCAGCCGCTTGACATCTGAATCCCGTATTTATGCTGAGAAGGCCAGAGACCTAAATAGACAGGCCCTGATCCGTAAATGGGCTCCTGTTGCCATTGTGATTGGAGTTGTGGTGCTACTCTTCTGGGTGCAAAAGAAGATCTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_72231.p1 GENE.S_Transcript_72231~~S_Transcript_72231.p1 ORF type:5prime_partial len:225 (-),score=50.59,Longin|PF13774.2|2.2e-24,Synaptobrevin|PF00957.17|1.7e-19 S_Transcript_72231:408-1082(-)
KDCIVEMVKVTMLARVTDGLPLAEGLDDGRDVADVDYYKQQIKALFKNLSKGQNDPSRMSIESGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEELKNEFERVNGNQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNISKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRIYAEKARDLNRQALIRKWAPVAIVIGVVVLLFWVQKKIW*

Click here to download the sequence:
Link to NCBI Protein BLAST