Transcript Information: S_Transcript_72256.p1


Annotated TAIR IDAT2G40316.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 27 (InterPro:IPR018939); Has 138 Blast hits to 138 proteins in 57 species: Archae - 0; Bacteria - 0; Metazoa - 32; Fungi - 62; Plants - 33; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:16836355-16838688 | Forward length=276
E-Value1.1E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 24.8204414159276
Replicate 30
Condition 2: 8 Hour
Replicate 12.5088694490745
Replicate 22.8199809209739
Replicate 31.0747486187386
Condition 3: 24 Hour
Replicate 11.4685635960063
Replicate 22.4758785755674
Replicate 32.7553493887942


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_72256.p1 GENE.S_Transcript_72256~~S_Transcript_72256.p1 ORF type:5prime_partial len:119 (+),score=9.79 S_Transcript_72256:1-357(+)
GGCCGTGATTTGAAGTTCGGCATCAATCTAATGGATAAAAGGACTCCAGATTTGGGTGTCAACGTTACGATGTCAAGCAATAGCCACGGAGTCAACTGTTCACTTTCTATCTCTGTCGTATGTGACTTAAATGGTTTTAAGGAGCCGCAGTCATTTGAAAAATTAGGGACCTGTAATTATGCTACTGTGCTGAGGCATCCGTCTGGCTGCCCCAAGGTTGTATCAGTTCATGGGAAAGGATGGGGTTGGTTTGGTGTTCTTTTGACAATCCTACCTGCTGATTGGTGCAGTGTACCGGTATTTCTTCCTTGGAATTCGGGGTTTAGATGTTATCCCAAACTTAGACTTTTGGATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_72256.p1 GENE.S_Transcript_72256~~S_Transcript_72256.p1 ORF type:5prime_partial len:119 (+),score=9.79 S_Transcript_72256:1-357(+)
GRDLKFGINLMDKRTPDLGVNVTMSSNSHGVNCSLSISVVCDLNGFKEPQSFEKLGTCNYATVLRHPSGCPKVVSVHGKGWGWFGVLLTILPADWCSVPVFLPWNSGFRCYPKLRLLD*

Click here to download the sequence:
Link to NCBI Protein BLAST