Transcript Information: S_Transcript_72258.p1


Annotated TAIR IDAT2G40316.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 27 (InterPro:IPR018939); Has 138 Blast hits to 138 proteins in 57 species: Archae - 0; Bacteria - 0; Metazoa - 32; Fungi - 62; Plants - 33; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:16836355-16838688 | Forward length=276
E-Value2E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.867960010283
Replicate 25.5156973893787
Replicate 38.9721418785084
Condition 2: 8 Hour
Replicate 111.383147534145
Replicate 28.7673460885415
Replicate 310.081819813167
Condition 3: 24 Hour
Replicate 110.922441745297
Replicate 27.8098269621197
Replicate 37.1576071960465


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_72258.p1 GENE.S_Transcript_72258~~S_Transcript_72258.p1 ORF type:internal len:148 (+),score=6.41,ATG27|PF09451.6|1.2e-11 S_Transcript_72258:1-441(+)
GGCCGTGATTTGAAGTTCGGCATCAATCTAATGGATAAAAGGACTCCAGATTTGGGTGTCAACGTTACGATGTCAAGCAATAGCCACGGAGTCAACTGTTCACTTTCTATCTCTGTCGTATGTGACTTAAATGGTTTTAAGGAGCCGCAGTCATTTGAAAAATTAGGGACCTGTAATTATGCTACTGTGCTGAGGCATCCGTCTGGCTGCCCCAAGGTTGTATCAGTTCATGGGAAAGGATGGGGTTGGTTTGGTGTTCTTTTGACAATATTATTATGTATCCTTGTAGCCTACCTGCTGATTGGTGCAGTGTACCGGTATTTCTTCCTTGGAATTCGGGGTTTAGATGTTATCCCAAACTTAGACTTTTGGATTAGCATACCACATAGAACAAAGACTTTATTCATGTCATTGGTGCAAAGGTTTAGAGGGCCTACTTAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_72258.p1 GENE.S_Transcript_72258~~S_Transcript_72258.p1 ORF type:internal len:148 (+),score=6.41,ATG27|PF09451.6|1.2e-11 S_Transcript_72258:1-441(+)
GRDLKFGINLMDKRTPDLGVNVTMSSNSHGVNCSLSISVVCDLNGFKEPQSFEKLGTCNYATVLRHPSGCPKVVSVHGKGWGWFGVLLTILLCILVAYLLIGAVYRYFFLGIRGLDVIPNLDFWISIPHRTKTLFMSLVQRFRGPTY

Click here to download the sequence:
Link to NCBI Protein BLAST