Transcript Information: S_Transcript_72267.p1


Annotated TAIR IDAT2G39140.1
Annotated Gene Namepseudouridine synthase family protein
Annotated Gene Symbol(s)SVR1
Annotation TypeOrtholog
Chromosome Positionchr2:16330238-16333153 | Forward length=410
E-Value6.9E-154
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 131.935601482217
Replicate 230.593734853087
Replicate 335.508414539626
Condition 2: 8 Hour
Replicate 130.822297471696
Replicate 237.64436397778
Replicate 331.547454455372
Condition 3: 24 Hour
Replicate 132.155668498155
Replicate 231.910646699497
Replicate 333.427616184914


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_72267.p1 GENE.S_Transcript_72267~~S_Transcript_72267.p1 ORF type:complete len:375 (+),score=66.22,PseudoU_synth_2|PF00849.18|3.9e+03,PseudoU_synth_2|PF00849.18|4.8e-18,S4|PF01479.21|7.2e-12 S_Transcript_72267:137-1261(+)
ATGGCGGCCATTACAGCAGCCATAACAAGTACTTCAACCCAATTCGCGGCCTATCACCTTATAAAACTCTCATCTCTCTCAATCCAAAGACCCTCCTCCCTTCCAACTCTCTCTCTTTGCTTCAGCACTTCACTCAATTCCCCTTCTTCTTCTTCTACCCTGATCAATGATTTCCACACCACCATTACCACTTTCTCTTCCAACAATTCCCACGCGCCTCCGAAAGTGCGTTCCTCACACGCGCTTTCCGAGAAGAAGGTGAAGCAGGAAGGGGATAATAAGACGACGAAAAAGTCCGGTAGCGAAGAGCCCAAGCACTCGAAGGCTGTCCGCAGGTTTTATAATGAGAAGTTTAGAGAGTCTCAGGCTCAGCGCCTTGCTAAAGTCCTTGCTGCTGCTGGTGTGGCATCACGGAGAAGCAGTGAGGAGCTTATATTTCAAGGAAAGGTGACTGTCAATGGTTCTGTTTGTGATACGCCTCAGACAAGAGTTGATCCTGCTCGAGATGTTATCTATGTCAATGGCAATCGCCTGCCTAAAAAGCTGCCACCTAAGTTGTATCTTGCTTTAAACAAGCCCAAGGGGTACATATGCTCTTCCGGAGAGAAAGAGTTCAAATCTATCTTGTCTTTATGTGAAGCTTATCTGAAGATTTGGGATAAAAGAAACCCAGGACAACAAAAGCCACGTCTATTTACTGTTGGACGTTTGGATGTTGCCACAACTGGATTAATTATTGTAACCAATGACGGAGACTTTGCTCAGAAAGTATCACATCCTTCGTCTAATTTAACAAAGGAATACATAGCCGCTGTTGATGGTGAAGTTCACAAACAACACTTAATGGCCATTAGCAATGCAACAATAATTGATGGTGTGCATTGCACTCCTGAGTCTGTAGAACTACTTCCTCGGCAGCCAGATATAACTAGAGCTCGCATTCGCATTGTGGTTAATGAAGGAAGAAACCATGAGGTCCGAGAGCTGGTGAAGAATGCTGGTCTTGAGATACATTCCTTAAAACGTACAAGAATCGGTGGATTCAGGCTTTCTGCTGATCTTGGGCTTGGTAAATGTGTTCAACTGAAAGAAAATGATCTCAAAGCTCTTGGATGGGATAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_72267.p1 GENE.S_Transcript_72267~~S_Transcript_72267.p1 ORF type:complete len:375 (+),score=66.22,PseudoU_synth_2|PF00849.18|3.9e+03,PseudoU_synth_2|PF00849.18|4.8e-18,S4|PF01479.21|7.2e-12 S_Transcript_72267:137-1261(+)
MAAITAAITSTSTQFAAYHLIKLSSLSIQRPSSLPTLSLCFSTSLNSPSSSSTLINDFHTTITTFSSNNSHAPPKVRSSHALSEKKVKQEGDNKTTKKSGSEEPKHSKAVRRFYNEKFRESQAQRLAKVLAAAGVASRRSSEELIFQGKVTVNGSVCDTPQTRVDPARDVIYVNGNRLPKKLPPKLYLALNKPKGYICSSGEKEFKSILSLCEAYLKIWDKRNPGQQKPRLFTVGRLDVATTGLIIVTNDGDFAQKVSHPSSNLTKEYIAAVDGEVHKQHLMAISNATIIDGVHCTPESVELLPRQPDITRARIRIVVNEGRNHEVRELVKNAGLEIHSLKRTRIGGFRLSADLGLGKCVQLKENDLKALGWDK*

Click here to download the sequence:
Link to NCBI Protein BLAST