Transcript Information: S_Transcript_72290.p1


Annotated TAIR IDAT5G46920.1
Annotated Gene NameIntron maturase, type II family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19053668-19055875 | Forward length=735
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.8718731078808
Replicate 24.3475478501917
Replicate 34.7550332443906
Condition 2: 8 Hour
Replicate 15.4589857349567
Replicate 26.2212691429074
Replicate 35.6135657596912
Condition 3: 24 Hour
Replicate 14.0632287892265
Replicate 23.4225277150285
Replicate 33.5766066651822


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_72290.p1 GENE.S_Transcript_72290~~S_Transcript_72290.p1 ORF type:complete len:543 (+),score=108.01,Intron_maturas2|PF01348.17|3.2e-08 S_Transcript_72290:976-2604(+)
ATGGTTTTGGAGCCGGTTTATGAGGCTCGTTTTTCTCAGAAATCGTATGCATTTAGGCCTGGCAGGACTCCTCACACTGTTTTGAGGGTTATTAGGAGGAGCTTTGCGGGGTACTTGTGGTATATAAGAGGTGATTTGAGTACCATTCTTGATGGCATGAAGGTGGGTATGGTTGTAAATGCTTTAATGAGGGATGTTAGGGACAAGATGGTGATTGATTTGATAAGATCAGCGTTGGTGACGCCAGTGATTATGACAAAGATTGAGGATGAGAAAAAGAAGAAGAAGACGAAAAGGAAGTATCAGAAGAAGAGGGTGTTGGCGGAGGATGAACCGAAGCCTGATCCCTACTGGTTAAATACGTTTTTCGGGTTTGCTCCAGAGGAGGCAGAAAAGGTTCCGTCTTGGGGTCACTGTGGGATTCTTAGTCCTCTCTTGGCAAACATATGCCTGAATGAATTGGATCATTGGATGGAGGGTAAGATCAAGGAGTTTTATTGTCCCTCGAAAAGTGATGTCATATGGAATACACCTGAGGGCGAATCAGAACAGGGGAATACTTCTTGGCCTGAGTTTGTTCCCACCAGTGGGCCTGACAAGACCCGCAAGATGGATTATATACGATATGGAGGTCATATTTTGATTGGAATTCGAGGGCCTAGAGCTGATGCGGCAATATTGAGAAAGCAATTAATTGAATTCTGTGATCAGAAATATCTCCTGAAGCTTGACAATGAGAGCTTACCCATTGAGCATATCACTAAGGGTATCATGTTTCTTGACCATGTGTTATGTCGAAGAGTTGTTTACCCCACACTGCGCTACACTGCCACTGGAGGTAAAATTATCAGTGAGAAGGGTGTAGGAACCCTTTTATCAGTTACAGCAAGTCTCAAACATTGTATTAAGCAATTCAGGAAACTGAACTTTCTCAAGGGTGATCGAGACCCAGATCCACAGCCTTGTTTCAGAATGTTCCATGCTACACAAGCACATACAAATGCGCAGATGAATAAGCTTCTCTCCACTATGGTTGAGTGGTACAGGTATGCTGATAACAGGAAGAAGGTGGTCAATTTTTGTTCTTACATCATCAGAGGTTCACTTGCCAAACTTTATGCTGCAAAATATAAGCTTCGGTCACGTGCAAAGGTGTACAAGATTAGTGACAGGACCCTAAGTCGTCCTTTGAAGGAGAAAAAGGGTCTATCACCCGAGTATCAGAACATGTTGAGGATGGGACTTGCAGAGTCCATTGAAGGGCTAAAATATACCCGTATGTCTCTTGTGCCTGAGACTGACTACAGCCCTTTCCCCAGTAATTGGAGACCCGACCATGAAAAGGCATTACTTGAGTATCTAAGCCTTGATGACCCGAAGACTTTGGAGGATCAGCGGAGCTGCATCAGAGATGAAGGTCTCATCTCACCTCAAGATTACATTTCTATGCTTGTCTGGAACTATAAGAGAAATGCTATCATCACGGATCAGCTTTCACCAGTGGATAGTGGTGATGATTCTGAAGAAAATGAGGACACATTGCTTCTAGAGCCAAGCAATGAGAACAATGGCAGGAAAAGCGAAGATGAGGAAGAAAATACAGAAGGCGTTACTGTGGCACGCATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_72290.p1 GENE.S_Transcript_72290~~S_Transcript_72290.p1 ORF type:complete len:543 (+),score=108.01,Intron_maturas2|PF01348.17|3.2e-08 S_Transcript_72290:976-2604(+)
MVLEPVYEARFSQKSYAFRPGRTPHTVLRVIRRSFAGYLWYIRGDLSTILDGMKVGMVVNALMRDVRDKMVIDLIRSALVTPVIMTKIEDEKKKKKTKRKYQKKRVLAEDEPKPDPYWLNTFFGFAPEEAEKVPSWGHCGILSPLLANICLNELDHWMEGKIKEFYCPSKSDVIWNTPEGESEQGNTSWPEFVPTSGPDKTRKMDYIRYGGHILIGIRGPRADAAILRKQLIEFCDQKYLLKLDNESLPIEHITKGIMFLDHVLCRRVVYPTLRYTATGGKIISEKGVGTLLSVTASLKHCIKQFRKLNFLKGDRDPDPQPCFRMFHATQAHTNAQMNKLLSTMVEWYRYADNRKKVVNFCSYIIRGSLAKLYAAKYKLRSRAKVYKISDRTLSRPLKEKKGLSPEYQNMLRMGLAESIEGLKYTRMSLVPETDYSPFPSNWRPDHEKALLEYLSLDDPKTLEDQRSCIRDEGLISPQDYISMLVWNYKRNAIITDQLSPVDSGDDSEENEDTLLLEPSNENNGRKSEDEEENTEGVTVARM*

Click here to download the sequence:
Link to NCBI Protein BLAST