Transcript Information: S_Transcript_72538.p1


Annotated TAIR IDAT5G40670.1
Annotated Gene NamePQ-loop repeat family protein / transmembrane family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:16285968-16287591 | Forward length=270
E-Value3.5E-129
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0235769705839
Replicate 22.0365651899244
Replicate 31.702406407717
Condition 2: 8 Hour
Replicate 11.9684975677354
Replicate 24.3022785845628
Replicate 31.8036486434984
Condition 3: 24 Hour
Replicate 11.6803756531226
Replicate 21.1331905788174
Replicate 31.0670864940626


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_72538.p1 GENE.S_Transcript_72538~~S_Transcript_72538.p1 ORF type:complete len:260 (+),score=17.46,PQ-loop|PF04193.10|2.3e-19,PQ-loop|PF04193.10|2.1e-15,PQ-loop|PF04193.10|3.2e+03 S_Transcript_72538:186-965(+)
ATGGGAGAATGGAATTCAATAGAACTCAAAGTGGTGTCTCAAGTGTTAGGATGGTTAGCTTTTGTGGCTTGGTCTATCAGCTTCTACCCACAAGTCATATTGAATTTTCGACGTAAAAGTGTGGTGGGATTGAATTTTGATTTTGTGATCCTAAATTTGACTAAGCACTCGTCGTATTTGATATACAATGCGGTTCTGTTCTTCAGCCGCACTGTTCAAGCTCAGTATCGCCACAAGTTTGGTTCCAACGAGATGATACCTGTTGAAGCGAATGATGTGGCTTTCTCAATGCATGCAGTTCTCTTAACTGCGTTTACTCTCTTCCAGATTTTCATCTATGAGCGGAAAAATCAGAGATTCTCGAAAATAGCTATTGGAATTGTCTCTGCTGTATGGTTGTCAGCTGCAATCTGTGTTTTTGTAGCTATTCACAGACATTCAAGGCTCTGGTTGATCTCCGTTTTCAACACGATTCTGATCGTAATGACCGTGATCAAATACATTCCACAGGCATTCATGAACTTCCAAAGGAAAAGTACAGATGGGTTCAGTATAGGAAACATTCTACTTGATTTGCTGGGAGGTTTGACAAATTATGGACAGATGGTCGTACAATCAATAGACCAGAATTCATGGGTCAACTTCTATGGAAACATAGGGAAGACACTTCTATCATTGGTGTCCATATTCTTCGACATCCTGTTCATCATTCAACATTATGTGCTCTATCCAGCGAAGAAAAAGATGCTGCCTACTACTACTAGTACTTCTCAATCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_72538.p1 GENE.S_Transcript_72538~~S_Transcript_72538.p1 ORF type:complete len:260 (+),score=17.46,PQ-loop|PF04193.10|2.3e-19,PQ-loop|PF04193.10|2.1e-15,PQ-loop|PF04193.10|3.2e+03 S_Transcript_72538:186-965(+)
MGEWNSIELKVVSQVLGWLAFVAWSISFYPQVILNFRRKSVVGLNFDFVILNLTKHSSYLIYNAVLFFSRTVQAQYRHKFGSNEMIPVEANDVAFSMHAVLLTAFTLFQIFIYERKNQRFSKIAIGIVSAVWLSAAICVFVAIHRHSRLWLISVFNTILIVMTVIKYIPQAFMNFQRKSTDGFSIGNILLDLLGGLTNYGQMVVQSIDQNSWVNFYGNIGKTLLSLVSIFFDILFIIQHYVLYPAKKKMLPTTTSTSQS*

Click here to download the sequence:
Link to NCBI Protein BLAST