Transcript Information: S_Transcript_72540.p1


Annotated TAIR IDAT5G40670.1
Annotated Gene NamePQ-loop repeat family protein / transmembrane family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:16285968-16287591 | Forward length=270
E-Value1.2E-140
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 137.469568526066
Replicate 235.84207689849
Replicate 334.35542172974
Condition 2: 8 Hour
Replicate 127.17639993483
Replicate 226.733147652525
Replicate 323.778328194727
Condition 3: 24 Hour
Replicate 142.11251907573
Replicate 235.427546615734
Replicate 335.693290277276


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_72540.p1 GENE.S_Transcript_72540~~S_Transcript_72540.p1 ORF type:complete len:277 (+),score=37.68,PQ-loop|PF04193.10|7.3e-18,PQ-loop|PF04193.10|6.2e+03,PQ-loop|PF04193.10|3.7e-15,PQ-loop|PF04193.10|4e+03 S_Transcript_72540:274-1104(+)
ATGGGAAGTGAATGGAATTCGTTTCCATTGGAGATTGTTTATGAGGTTTTTGGATGGATTGCTTTCTTTTCATGGTCAATCAGCTTTTACCCGCAAGTTTTCTTGAATTTCAGGCGTAAAAGTGTGGTGGGATTGAATTTTGATTTTGTGGTGCTGAATTTGACAAAGCATAGCTCCTATTTGGTATACAATGCCACTCTTTACTTCAGCTCTGCTGTTCAGAAGCAATACCGTGAGAAATATGGTCTAAAGGAGATGATACCTGTGGCTGCAAATGATGTTGCTTTTTCTATTCATGCTGTCACATTGACAGCACTCACATTGTTCCAGATATATATCTATGAGCGTGGAAGTCAGACGATCTCGAAGATTGCTCTTGCACTTGTTTCTGTTGCATGGTTTGCTGCAGCAATATGTGTATTTATTGCTTTGCCAAGCCATTCTTGGCTTTGGTTGATCTCTGTTTTCAACACAATCCAAGTGGTCATGACAGTCATTAAATATATTCCCCAGGCGGTTATGAACTTCTGCAGGAAAAGCACAGAAGGATTTAGCATAGGAAACATTCTACTGGATTTTCTTGGAGGTGTGACAAATTACGGACAGATGACTATACAGTCTATAGATCAAGGTTCTTGGGTGAACTTCTATGGAAATATTGGGAAGACATTACTGTCACTTGTCTCGATCTTGTTCGACATTCTGTTCATGTTGCAACATTACGTGTTATATCGTGGGAGGAAGGCAACTCATCTTCCTTCTACACTCGATAATGTTAGCAAGGAGGCGCTACTAAAAGACTCTCATCAAGCCCAGACAGACCATGTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_72540.p1 GENE.S_Transcript_72540~~S_Transcript_72540.p1 ORF type:complete len:277 (+),score=37.68,PQ-loop|PF04193.10|7.3e-18,PQ-loop|PF04193.10|6.2e+03,PQ-loop|PF04193.10|3.7e-15,PQ-loop|PF04193.10|4e+03 S_Transcript_72540:274-1104(+)
MGSEWNSFPLEIVYEVFGWIAFFSWSISFYPQVFLNFRRKSVVGLNFDFVVLNLTKHSSYLVYNATLYFSSAVQKQYREKYGLKEMIPVAANDVAFSIHAVTLTALTLFQIYIYERGSQTISKIALALVSVAWFAAAICVFIALPSHSWLWLISVFNTIQVVMTVIKYIPQAVMNFCRKSTEGFSIGNILLDFLGGVTNYGQMTIQSIDQGSWVNFYGNIGKTLLSLVSILFDILFMLQHYVLYRGRKATHLPSTLDNVSKEALLKDSHQAQTDHV*

Click here to download the sequence:
Link to NCBI Protein BLAST