Transcript Information: S_Transcript_72579.p1


Annotated TAIR IDAT1G08190.1
Annotated Gene Namevacuolar protein sorting 41
Annotated Gene Symbol(s)ATVPS41, ZIP2, VPS41, ATVAM2, VAM2
Annotation TypeOrtholog
Chromosome Positionchr1:2567652-2573142 | Forward length=980
E-Value1.5E-81
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.9570001372423
Replicate 22.9675097065663
Replicate 33.235567733965
Condition 2: 8 Hour
Replicate 14.614265741134
Replicate 25.494840016775
Replicate 34.9861631824518
Condition 3: 24 Hour
Replicate 15.8764014068265
Replicate 24.9038656627184
Replicate 33.0974440497511


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_72579.p1 GENE.S_Transcript_72579~~S_Transcript_72579.p1 ORF type:5prime_partial len:171 (+),score=37.61 S_Transcript_72579:2-514(+)
AGCAAATACGGGCTTCTTCAGAATGGGTGGGACGCCTTGGCTTCTAATGTCTCCTTTGCTTGTCCTTGGAAGTTTGTCACTCAGGGTAATGCACAAAGACCAGAAGTACGTGTCGTGACATGGACAGATGATGAACTCGCAACTGATGCATTGCCTGTTCATGGTTTTGAACATTATAAAGCAAAAGATTATGCTCTTTCATATACTCCCTTCTCAGGGAACAGCTATGTCAATGGCCGGTGGGTAATTGGTGATGAGCCACTATACTATATTGTGTCGCCAAAGGACATCGTTATTGCTAAGCCAAGGGATACTGAAGATCATATCAATTGGCTTCTTGAACATGGCCGGTATGATAAAGCTCTAGCTGAAGTTGAAGCAACACAAGGACGGAAAGAACTTTTTGAAGAGGTGGGATCGAGATACCTTGAACATCTACTTGCTGAGAAAAAATATGCTGATGCTGCATCGTTGTGTCCAAAATTGTTGCAAGGATCTGCATCAGCATGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_72579.p1 GENE.S_Transcript_72579~~S_Transcript_72579.p1 ORF type:5prime_partial len:171 (+),score=37.61 S_Transcript_72579:2-514(+)
SKYGLLQNGWDALASNVSFACPWKFVTQGNAQRPEVRVVTWTDDELATDALPVHGFEHYKAKDYALSYTPFSGNSYVNGRWVIGDEPLYYIVSPKDIVIAKPRDTEDHINWLLEHGRYDKALAEVEATQGRKELFEEVGSRYLEHLLAEKKYADAASLCPKLLQGSASAW*

Click here to download the sequence:
Link to NCBI Protein BLAST