Transcript Information: S_Transcript_72672.p1


Annotated TAIR IDAT1G69640.1
Annotated Gene Namesphingoid base hydroxylase 1
Annotated Gene Symbol(s)SBH1
Annotation TypeOrtholog
Chromosome Positionchr1:26193933-26195466 | Reverse length=260
E-Value6.3E-154
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 132.054321190329
Replicate 231.330801527772
Replicate 332.634730021539
Condition 2: 8 Hour
Replicate 143.205716441775
Replicate 241.583361783879
Replicate 341.680802380001
Condition 3: 24 Hour
Replicate 125.905270756504
Replicate 226.960668046213
Replicate 322.221652505623


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_72672.p1 GENE.S_Transcript_72672~~S_Transcript_72672.p1 ORF type:complete len:269 (+),score=29.82,FA_hydroxylase|PF04116.9|2.9e+03,FA_hydroxylase|PF04116.9|9.9e-25 S_Transcript_72672:389-1195(+)
ATGAAGATGGATTTTATGGTGATGATGGGTGGTAAAAAAATGGAGATATCAGATGAGATGTTAGGAACATTTGCACCAATAGTGGTGTATTGGGCATATTCAGGGATTTATATGATGCTGGGGAGTTTGGATAATTATAGGTTACATTCTAGAAAAGATGAAGATGAGAAGAATGTTGTTTCTAAATTCCAAGTCGTTAAGGGTGTTCTTCTTCAACAAGCTTTTCAAGCTATTGTTGCTATGATCCTTTTTGCTGTGACAGGATCAAGTCAGGCTGCAGATGACAAGAACACTTCCTTATTTGTTCTAGGTTGTCAATTTATTACCGCCATGATGGTTTTGGACACCTGGCAGTATTTCATGCATCGGTACATGCATCATAACAAATTCCTCTACCGCCATATTCATTCCCAGCATCACCGGCTTGTTGTCCCTTATGCCTTTGGTGCTCTTTACAACCATCCTTTGGAGGGAATTATCCTTGATACGGCTGGTGGCGCTCTAGCGTTTCTTGTTTCTGGTATGTCACCACGGACCTCAATTTTCTTCTTTACTTTTGCAACCATCAAGACGGTGGATGATCATTGCGGCCTATGGCTACCTGGGAACCTCTTTCATATCTTCTTCAAAAACAATACCGCATATCATGATGTGCATCACCAGCTTTACGGTAGCAAATACAACTTCTCACAGCCCTTCTTTGTGATGTGGGACCGAATCCTCGGAACCTACATGCCTTACTCACTCGAACCAAGAGAAGGTGGCGGGTTTGAGGCAAGACCTACGCGGGAGTGTAAGGTTGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_72672.p1 GENE.S_Transcript_72672~~S_Transcript_72672.p1 ORF type:complete len:269 (+),score=29.82,FA_hydroxylase|PF04116.9|2.9e+03,FA_hydroxylase|PF04116.9|9.9e-25 S_Transcript_72672:389-1195(+)
MKMDFMVMMGGKKMEISDEMLGTFAPIVVYWAYSGIYMMLGSLDNYRLHSRKDEDEKNVVSKFQVVKGVLLQQAFQAIVAMILFAVTGSSQAADDKNTSLFVLGCQFITAMMVLDTWQYFMHRYMHHNKFLYRHIHSQHHRLVVPYAFGALYNHPLEGIILDTAGGALAFLVSGMSPRTSIFFFTFATIKTVDDHCGLWLPGNLFHIFFKNNTAYHDVHHQLYGSKYNFSQPFFVMWDRILGTYMPYSLEPREGGGFEARPTRECKVD*

Click here to download the sequence:
Link to NCBI Protein BLAST