Transcript Information: S_Transcript_72793.p1


Annotated TAIR IDAT3G28760.2
Annotated Gene NameCONTAINS InterPro DOMAIN/s: 3-dehydroquinate synthase, prokaryotic-type (InterPro:IPR002812); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:10793126-10795304 | Reverse length=444
E-Value1.6E-125
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.122399088533
Replicate 219.957212130864
Replicate 318.060106704273
Condition 2: 8 Hour
Replicate 119.909596769108
Replicate 220.051117453033
Replicate 323.261692614565
Condition 3: 24 Hour
Replicate 116.587608625638
Replicate 219.936630930231
Replicate 317.896139391182


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_72793.p1 GENE.S_Transcript_72793~~S_Transcript_72793.p1 ORF type:5prime_partial len:241 (-),score=50.36,DHQS|PF01959.12|2.6e-100 S_Transcript_72793:236-958(-)
GTGTTTGCTATTTCTGAATCTGCTTTGGAGGCCCAAAGTCTCCTAGAGGCTCTGGAGCATGGTCTTGGTGGGGTCATCTTGAAAGTTGAGGAAATTGATGTTGTTCTCCAACTGAAGGAATATTTTGATAGAAGGAATGAAACAAGAAATCGCCTGACTTTAACAAAAGCAACTATAGATCGAGTGTGCATGGCTGGAATGGGGGATCGTGTTTGTGTAGATTTATGTAGCCTGATGAGATTCGGAGAGGGACTTCTGGTTGGATCCTTTGCTCGGGGCCTTTTTCTTGTTCACTCTGAGTGCCTGGAGACTGATTACATAGCGAGTCGACCCTTTCGAGTAAATGCGGGACCAGTACATTCTTATGTAGCTGTCCCAGGTGGAAAGACTTGCTACCTCTCTGAACTAAAAGCAGGGAAAGAAGTGATTGTGGTTGACCAGAGTGGGCAGCAAAGAACTGCAATTGTTGGCCGTGTTAAGATAGAAACTCGGCCGATGGTACTTGTAGAGGCTAAGGGCAATTCATCTGATCAAAGCTTTTACAGTATACTTCTGCAGAATGCAGAAACAGTTGCCTTGATTGCTCCAACTGAAGGACATGGATCTCACAGCACGGCAATTCCTGTGACTTCTTTGAAAGTTGGTGACGAGGTTTTGCTAAGAGTCCAGGGCGGGGCTCGACACACTGGAATAGAGATTCAAGAATTTATTGTTGAAAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_72793.p1 GENE.S_Transcript_72793~~S_Transcript_72793.p1 ORF type:5prime_partial len:241 (-),score=50.36,DHQS|PF01959.12|2.6e-100 S_Transcript_72793:236-958(-)
VFAISESALEAQSLLEALEHGLGGVILKVEEIDVVLQLKEYFDRRNETRNRLTLTKATIDRVCMAGMGDRVCVDLCSLMRFGEGLLVGSFARGLFLVHSECLETDYIASRPFRVNAGPVHSYVAVPGGKTCYLSELKAGKEVIVVDQSGQQRTAIVGRVKIETRPMVLVEAKGNSSDQSFYSILLQNAETVALIAPTEGHGSHSTAIPVTSLKVGDEVLLRVQGGARHTGIEIQEFIVEK*

Click here to download the sequence:
Link to NCBI Protein BLAST