Transcript Information: S_Transcript_72796.p1


Annotated TAIR IDAT3G28760.2
Annotated Gene NameCONTAINS InterPro DOMAIN/s: 3-dehydroquinate synthase, prokaryotic-type (InterPro:IPR002812); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:10793126-10795304 | Reverse length=444
E-Value7.3E-160
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.48246345428
Replicate 29.3209088467703
Replicate 313.59374704589
Condition 2: 8 Hour
Replicate 114.903812109277
Replicate 215.785978590728
Replicate 314.70553980838
Condition 3: 24 Hour
Replicate 19.3761185319179
Replicate 211.45923057231
Replicate 38.8418852296587


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_72796.p1 GENE.S_Transcript_72796~~S_Transcript_72796.p1 ORF type:complete len:445 (+),score=83.44,DHQS|PF01959.12|2.1e-119 S_Transcript_72796:211-1545(+)
ATGGCTTTCTCATTGTGTGCTTCGTCCACCGAAATTATAAGGCCTCATTCCTCACATTCACTGCTTAAACCCCAATCTGGGAAATGGAAAAATTGCAGATTGAAAACTGGCAAGGGCCTTTCTCTATCAACTGGAATCAAACCCAGAAACTGTAAACCAAGTAAAAGCAGATTGCAAAAATACAATTGTTGTTTAAAAATGGAATCTTTGAAGACAAATGGGGAGCCCAAGTTGGTGTGGATTTGGACAGAGAATAAGCAAGTCATGACAGCTGCAGTTGAGAGAGGATGGAATACCTTCATCTTTGACTCTAATTCTGCTGAACTTGCAAAGGATTGGTTTTCAATGGCATTGATTAATCCTTTATACGTCAAAGATGGGTTACTTACGGATTCTGAAAGTAGAAGTGTAGCCTCACTTATTGATATTTCATCTCCAAAAGATTTAGACAAGATGCTTCTCTTGGATGATTTGGACAACATTGTCATTCGTTTTCTAGATTGGCAGGTGATACCTGCAGAAAATATCGTTGCTGCTTCCCAAGGCAATAACAAGAGGGTGTTTGCTATTTCTGAATCTGCTTTGGAGGCCCAAAGTTTCCTAGAGGCTCTGGAGCATGGTCTTGGTGGGGTCATCTTGAAAGTTGAGGAAATTGATGTTGTTCTCCAACTGAAGGAATATTTTGATAGAAGGAATGAAACAAGAAATCGCCTGACTTTAACAAAAGCAACTATAGATCGAGTGTGCATGGCTGGAATGGGGGATCGTGTTTGTGTAGATTTATGTAGCCTGATGAGATTCGGAGAGGGACTTCTGGTTGGATCCTTTGCTCGGGGCCTTTTTCTTGTTCACTCTGAGTGCCTGGAGACTGATTACATAGCGAGTCGACCCTTTCGAGTAAATGCGGGACCAGTACATTCTTATGTAGCTGTCCCAGGTGGAAAGACTTGCTACCTCTCTGAACTAAAAGCAGGGAAAGAAGTGATTGTGGTTGACCAGAGTGGGCAGCAAAGAACTGCAATTGTTGGCCGTGTTAAGATAGAAACTCGGCCGATGGTACTTGTAGAAGCTAAGGTGCGAGGGTTTGACAGGAACTTCTTAACCTGTATGATTTGTATGTACACGTATGGCAATTCATCTGATCAAAGCTTTTACAGTATACTTCTGCAGAATGCAGAAACAGTTGCCTTGATTGCTCCAACTGAAGGACATGGATCTCACAGCACGGCAATTCCTGTGACTTCTTTGAAAGTTGGTGACGAGGTTTTGCTAAGAGTCCAGGGCGGGGCTCGACACACTGGAATAGAGATTCAAGAATTTATTGTTGAAAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_72796.p1 GENE.S_Transcript_72796~~S_Transcript_72796.p1 ORF type:complete len:445 (+),score=83.44,DHQS|PF01959.12|2.1e-119 S_Transcript_72796:211-1545(+)
MAFSLCASSTEIIRPHSSHSLLKPQSGKWKNCRLKTGKGLSLSTGIKPRNCKPSKSRLQKYNCCLKMESLKTNGEPKLVWIWTENKQVMTAAVERGWNTFIFDSNSAELAKDWFSMALINPLYVKDGLLTDSESRSVASLIDISSPKDLDKMLLLDDLDNIVIRFLDWQVIPAENIVAASQGNNKRVFAISESALEAQSFLEALEHGLGGVILKVEEIDVVLQLKEYFDRRNETRNRLTLTKATIDRVCMAGMGDRVCVDLCSLMRFGEGLLVGSFARGLFLVHSECLETDYIASRPFRVNAGPVHSYVAVPGGKTCYLSELKAGKEVIVVDQSGQQRTAIVGRVKIETRPMVLVEAKVRGFDRNFLTCMICMYTYGNSSDQSFYSILLQNAETVALIAPTEGHGSHSTAIPVTSLKVGDEVLLRVQGGARHTGIEIQEFIVEK*

Click here to download the sequence:
Link to NCBI Protein BLAST