Transcript Information: S_Transcript_72797.p2


Annotated TAIR IDAT3G28760.2
Annotated Gene NameCONTAINS InterPro DOMAIN/s: 3-dehydroquinate synthase, prokaryotic-type (InterPro:IPR002812); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:10793126-10795304 | Reverse length=444
E-Value1.1E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.902512087509
Replicate 27.3542631858383
Replicate 37.2913142656095
Condition 2: 8 Hour
Replicate 17.7697158519787
Replicate 28.1509836129236
Replicate 39.253391208364
Condition 3: 24 Hour
Replicate 16.7736072839052
Replicate 25.2706538549645
Replicate 38.0163086868974


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_72797.p2 GENE.S_Transcript_72797~~S_Transcript_72797.p2 ORF type:complete len:129 (+),score=22.70 S_Transcript_72797:211-597(+)
ATGGCTTTCTCATTGTGTGCTTCGTCCACCGAAATTATAAGGCCTCATTCCTCACATTCACTGCTTAAACCCCAATCTGGGAAATGGAAAAATTGCAGATTGAAAACTGGCAAGGGCCTTTCTCTATCAACTGGAATCAAACCCAGAAACTGTAAACCAAGTAAAAGCAGATTGCAAAAATACAATTGTTGTTTAAAAATGGAATCTTTGAAGACAAATGGGGAGCCCAAGTTGGTGTGGATTTGGACAGAGAATAAGCAAGTCATGACAGCTGCAGTTGAGAGAGGATGGAATACCTTCATCTTTGACTCTAATTCTGCTGAACTTGCAAAGGATTGGTCTTGTGATACCTGCAGAAAATATCGTTGCTGCTTCCCAAGGCAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_72797.p2 GENE.S_Transcript_72797~~S_Transcript_72797.p2 ORF type:complete len:129 (+),score=22.70 S_Transcript_72797:211-597(+)
MAFSLCASSTEIIRPHSSHSLLKPQSGKWKNCRLKTGKGLSLSTGIKPRNCKPSKSRLQKYNCCLKMESLKTNGEPKLVWIWTENKQVMTAAVERGWNTFIFDSNSAELAKDWSCDTCRKYRCCFPRQ*

Click here to download the sequence:
Link to NCBI Protein BLAST