Transcript Information: S_Transcript_72801.p1


Annotated TAIR IDAT3G28760.2
Annotated Gene NameCONTAINS InterPro DOMAIN/s: 3-dehydroquinate synthase, prokaryotic-type (InterPro:IPR002812); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:10793126-10795304 | Reverse length=444
E-Value1E-53
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8947767869708
Replicate 24.1412355803749
Replicate 31.3727602910123
Condition 2: 8 Hour
Replicate 13.5197246154491
Replicate 20
Replicate 34.8288327907725
Condition 3: 24 Hour
Replicate 13.2519891280496
Replicate 21.6136047077011
Replicate 36.4483543948355


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_72801.p1 GENE.S_Transcript_72801~~S_Transcript_72801.p1 ORF type:complete len:309 (+),score=56.97,DHQS|PF01959.12|4.5e-46 S_Transcript_72801:211-1137(+)
ATGGCTTTCTCATTGTGTGCTTCGTCCACCGAAATTATAAGGCCTCATTCCTCACATTCACTGCTTAAACCCCAATCTGGGAAATGGAAAAATTGCAGATTGAAAACTGGCAAGGGCCTTTCTCTATCAACTGGAATCAAACCCAGAAACTGTAAACCAAGTAAAAGCAGATTGCAAAAATACAATTGTTGTTTAAAAATGGAATCTTTGAAGACAAATGGGGAGCCCAAGTTGGTGTGGATTTGGACAGAGAATAAGCAAGTCATGACAGCTGCAGTTGAGAGAGGATGGAATACCTTCATCTTTGACTCTAATTCTGCTGAACTTGCAAAGGATTGGTTTTCAATGGCATTGATTAATCCTTTATACGTCAAAGATGGGTTACTTACGGATTCTGAAAGTAGAAGTGTAGCCTCACTTATTGATATTTCATCTCCAAAAGATTTAGACAAGATGCTTCTCTTGGATGATTTGGACAACATTGTCATTCGTTTTCTAGATTGGCAGGTGATACCTGCAGAAAATATCGTTGCTGCTTCCCAAGGCAATAACAAGAGGGTGTTTGCTATTTCTGAATCTGCTTTGGAGGCCCAAAGTTTCCTAGAGGCTCTGGAGCATGGTCTTGGTGGGGTCATCTTGAAAGTTGAGGAAATTGATGTTGTTCTCCAACTGAAGGAATATTTTGATAGAAGGAATGAAACAAGAAATCGCCTGACTTTAACAAAAGCAACTATAGATCGAGTGTGCATGGCTGGAATGGGGGATCGTGTTTGTGTAGATTTATGTAGCCTGATGAGATTCGGAGAGGGACTTCTGGTTTATTTCTTTTCTCTTCTGCTGCCATCCTCCCTTGAACTGTTCCTTTCTTGTTTCCTTATGTCCATCTTTTGTTATGTGTTCATATTTGTTACTAGAATTTTTTGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_72801.p1 GENE.S_Transcript_72801~~S_Transcript_72801.p1 ORF type:complete len:309 (+),score=56.97,DHQS|PF01959.12|4.5e-46 S_Transcript_72801:211-1137(+)
MAFSLCASSTEIIRPHSSHSLLKPQSGKWKNCRLKTGKGLSLSTGIKPRNCKPSKSRLQKYNCCLKMESLKTNGEPKLVWIWTENKQVMTAAVERGWNTFIFDSNSAELAKDWFSMALINPLYVKDGLLTDSESRSVASLIDISSPKDLDKMLLLDDLDNIVIRFLDWQVIPAENIVAASQGNNKRVFAISESALEAQSFLEALEHGLGGVILKVEEIDVVLQLKEYFDRRNETRNRLTLTKATIDRVCMAGMGDRVCVDLCSLMRFGEGLLVYFFSLLLPSSLELFLSCFLMSIFCYVFIFVTRIFC*

Click here to download the sequence:
Link to NCBI Protein BLAST