Transcript Information: S_Transcript_72820.p2


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value1E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.2912332151179
Replicate 25.3106127506347
Replicate 34.0061520651265
Condition 2: 8 Hour
Replicate 19.0142550068507
Replicate 28.1869583084714
Replicate 37.717087684778
Condition 3: 24 Hour
Replicate 16.3268938485478
Replicate 24.257780648394
Replicate 35.5281193216693


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_72820.p2 GENE.S_Transcript_72820~~S_Transcript_72820.p2 ORF type:complete len:511 (+),score=59.51,zf-RVT|PF13966.2|2.2e-17,zf-RVT|PF13966.2|1.5e+04,RVT_3|PF13456.2|2.3e-14 S_Transcript_72820:4935-6467(+)
ATGGCTAAGTTGGGTTGGAAAACCCTTCTCTCTAGTGATAACCTAGCTGGGCATGTCCTTAAAGAGAAGTATATCCACAATAGGACCCAGGTTGTCCCCTTTAGGCTGGGCTCCCATATTTGGCAGGACATTGGGAAGGGGTGGGACATTCTTGATGAGCATATTGTTTGGTCCATTGGTAATGGTGAACGAACCTTGTTTTGGCTTGACCACTGGCTTCCAGGGGGAACCCTGCGGAGTCGAATTGAGGGACCCTTTACCTATGTGGAGTCTAACTTGAGAGTGAATGAGTGCATCCGCAATGATCATTGGTATCTGGATGGGCTGTCCTTTGCTCTCCCGGAGGACCTCCGTACTCATATCCTCCTCTTTCCTATTCCCTGTGGTTCATATTCTGACTTCCCAACTATCTCCCTTCTTCGGGATGGGAAGTTTGATTTGACCACCACTTATGAGTTTCTTAGGAACAACTCTAAGCCTGGGGAACCCCAAAATCTTGATTGGATTTGGAAGTGTTGCATTCTCCCCAAAATCCAATTCTTTCTTTGGCTCTCCTACTTAGATCGCCTACCTCATAAGACAACTCTAGCCACAAGGAACATTATACCTTTTGACTCTTGTCCGGTTTGTAATGAGAGAGAGGACACTATCCACATCCTTAGGAATTGTAGGGCGGCTAGGGAAATTTGGACTAAGTTTGAGACCACCATGGACTTCTTCTCCCTTGATAGGGAAGATTGGCTCAAGAACAACCTCACTTCTAAGAATGTTGTATCTCACATCCCTTGGAATATCCTTTTCTCATTCCTTGTTTGGGGTATTTGGAAGAGGCGCAACCTTGGCATTTTCAATCCCAATCCCATGCCCATTCATGTGTGGACCCAGCATATTTTATTCCAAGCTACAGAATTTTTCACATCCTCCCCTAATACCCAAAAATCCAAACTGCCAACCAACAATCGCCTCTGGGAACCACCTCCACCGGGTGTCATCAAGCTCGACATAGACGCCACTTTTGTCTTTGGTTATTGCGCAGGTATTGCAGGTGTAGCAAGGGATAGCCATGGGAAATGGTTATGGGGTTTTCAAGCCAAAACTTCATGCCACAGCCCTTTAATGGCGGAACTTCAAGCACTAAGGGAAGCACTACTTCAATGTTCCAAGAGAAACCTCCCTCATGTGCTGATTGCATCTGATTGTGCCCAAGCTATTAAGCTCCTCTCTCAACCAGTTGCACCGAGGTCAATAGTTACTAATCTAGTTTTGGAATGTAGGGAACTGAGAAGTGGTACCACTATGACCCAACTGATTAAGGAAGCAAGGGAAAATAACAAGGTAGCGGATTGCTTGGCAAGAGAAGCACGAGGATTCAACCACGGTGAAGTACAAGTGCTGCACTCTACTCCCGCCGTTTGCGAACGCCTGCTCTATGAAGATTATGTTAACATGTCTAATGTTTTGTCTAATGGACAACCTCCTAGAGGTAGTGTTGTAATCTCTGAATATGGCTCGATTTGTGCTCTTTCTATTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_72820.p2 GENE.S_Transcript_72820~~S_Transcript_72820.p2 ORF type:complete len:511 (+),score=59.51,zf-RVT|PF13966.2|2.2e-17,zf-RVT|PF13966.2|1.5e+04,RVT_3|PF13456.2|2.3e-14 S_Transcript_72820:4935-6467(+)
MAKLGWKTLLSSDNLAGHVLKEKYIHNRTQVVPFRLGSHIWQDIGKGWDILDEHIVWSIGNGERTLFWLDHWLPGGTLRSRIEGPFTYVESNLRVNECIRNDHWYLDGLSFALPEDLRTHILLFPIPCGSYSDFPTISLLRDGKFDLTTTYEFLRNNSKPGEPQNLDWIWKCCILPKIQFFLWLSYLDRLPHKTTLATRNIIPFDSCPVCNEREDTIHILRNCRAAREIWTKFETTMDFFSLDREDWLKNNLTSKNVVSHIPWNILFSFLVWGIWKRRNLGIFNPNPMPIHVWTQHILFQATEFFTSSPNTQKSKLPTNNRLWEPPPPGVIKLDIDATFVFGYCAGIAGVARDSHGKWLWGFQAKTSCHSPLMAELQALREALLQCSKRNLPHVLIASDCAQAIKLLSQPVAPRSIVTNLVLECRELRSGTTMTQLIKEARENNKVADCLAREARGFNHGEVQVLHSTPAVCERLLYEDYVNMSNVLSNGQPPRGSVVISEYGSICALSI*

Click here to download the sequence:
Link to NCBI Protein BLAST