Transcript Information: S_Transcript_72826.p1


Annotated TAIR IDAT5G46420.1
Annotated Gene Name16S rRNA processing protein RimM family
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:18829999-18832893 | Forward length=653
E-Value4.5E-201
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.2705950248677
Replicate 211.428922518532
Replicate 311.021334776686
Condition 2: 8 Hour
Replicate 114.793288778552
Replicate 214.276329837663
Replicate 314.178559292803
Condition 3: 24 Hour
Replicate 111.217642873548
Replicate 210.072805145043
Replicate 311.096184700749


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_72826.p1 GENE.S_Transcript_72826~~S_Transcript_72826.p1 ORF type:complete len:666 (+),score=131.18,RimM|PF01782.14|1.2e-17,PRC|PF05239.12|1.8e-11,UDPGP|PF01704.14|1.5e-05 S_Transcript_72826:81-2078(+)
ATGATGGTACTACAGAGCTCATTCTCTTTCATATGCTCTTCAAATTATCTATCTTCAACAGCAGCAACTTCACATTCTGGTAGACCCCTTAATATATCCTTTCACAATCCATGCCTTACTCCAAATTTAAACCCCTCTTCTTGTGTCACTCTTTTGCCCTTCAATAGACTCCAAGCTGCTGCTCATGGGCTCAGAGCCCCTCCCCTTTGTTGCACTGCTACTGAAGAGATTGTAGAGACAAGTGATGGACAGTTGGACTTTATTGAGATTGGGTACATATCTGATGTGCATGGGCTTCAGGGAGAGATTCGTGTAAAGCATAACACTGATTTCCCCGACTTGCGTTTTGGACAGCCTGGGAGAAAATGGTTGCGGCAGGAATATTCCGGGAGACAAAAAGTTTTTGAAGTTGAGCTTGTGACAGGAAGAGGCCATCCTGGGGACAAGAGTTGGATAGTCAAATTGAGTGGCTTTGACAGTATAGATCAGGCTAAACAGCTTGTTGGATCAACATTTCTTGTGAGGGAAAGTGACAGACCAGAGCTTGAGGAGGGCGAATTTTATAGTCGCGATCTTGTTGGCATGAGAGTTATTCTCAAGGACACAGGTGAAGTGGTAGGAACTGTTGTTAATGTCTTCAATAGTGGTGGCAATGATCTCTTGCACGTCATACTTGATTCTTCCACTGAGAATTCTGGGACATCTGAATCAGGCCAGCTTATCTGGATCCCATTTGTTGAAGCAATTGTTCCAGATGTTAATTTGGATAGAAGAGAGATGCAGATTACCCCTCCCAAAGGACTTCTTCAGTTAAATATACGCTCTGATGAGAGGTCCAAGAAAGAAAGACGTTTACTTGATTGGAAAGAAAGAAAGAAGTTTCAAAGGCGCCTTATTGCTGCGAAAAAGAAATTGTGTGAGTTGGAGCAGCAACACATCTTTGACGGGCTTAGATACGGAGAAAAATCCCAAAGGAGCTTGCTCGCAGAGCAAATTGTTTCCGTGAATTCAAGTCTGCTTCAGCAAGCACTTCGAGCCATTCAGGTGCCTATTAATGGATCTAATATGAGCGGCTCCATGCATGACACTATGCAATGGAAAAGTCTGAGTCCCTTGACGATCTCCGAGCAACACCTTGTAAGTGTGGGCAAAGAGAAGCTACATGCTTACTCTAATCATAAAGAAACTGGACTTCATCTCCTCTCTGAAGGCAAAGTTGCAACCGTATTAGTACTGAACAGTGGAGAACCAGAGAAATTCTCTGAGACTGATCTTGGAGATACTGAGCATGGTGAACATTCAAGCATGACTGTCATTGAGACTTTGCTTTTGGACATGCAAAAATTTGCAGAACACCGTGCATCTGTACCAGTTATCTTGATATCCTCAGCTCAAAATGTGCAAGCACTGGAAAACTTATTTGCAAGACATGACTATTTTGGTTTCAACTCGGAAAAGGTCAGATTCTTAGAAGAAGAGAAGCTCCCTGTTGTTAGCTGTTCTGCTGTAGAACAAAAGAAAAATAAAGTGCTGATGAAGTCACCTTGGGTAATACTCCAATCACCAATTGGGCCTGGCGGCATAATAAGTGCACTATCATCCTATAATATTGTGGAATATATGATTGAATCAGGTGTGGAGTATGTAGAGGTCTGCAGCATCAATAGGAGATGCCTTTGTGGGAACCCGATGTTTCTTGGCTTTGTGGATTCCCATCAACCGGATATTGGAATTCTAACCTTTAAAGACATGGCACAACTTGAAGATAACTTCCACATCGTCCTCCCTATGAAGTCTATGAATAAGTTGGTAAACCAGATTGACAAACTCCAGTTTGATGCCATCATGAAGTGCAATTCACATGTCGAGCTGGTTAATAAGGAGTGGATTGATGTTATCCCTTCGGAGACCAACTCTTATGAGTTTCGCTGTTCGCTTGACAACTTGTTGAATGCTTGTTCATTGCAAAAAGCTTGCCTTATGGAGGTTGCTGACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_72826.p1 GENE.S_Transcript_72826~~S_Transcript_72826.p1 ORF type:complete len:666 (+),score=131.18,RimM|PF01782.14|1.2e-17,PRC|PF05239.12|1.8e-11,UDPGP|PF01704.14|1.5e-05 S_Transcript_72826:81-2078(+)
MMVLQSSFSFICSSNYLSSTAATSHSGRPLNISFHNPCLTPNLNPSSCVTLLPFNRLQAAAHGLRAPPLCCTATEEIVETSDGQLDFIEIGYISDVHGLQGEIRVKHNTDFPDLRFGQPGRKWLRQEYSGRQKVFEVELVTGRGHPGDKSWIVKLSGFDSIDQAKQLVGSTFLVRESDRPELEEGEFYSRDLVGMRVILKDTGEVVGTVVNVFNSGGNDLLHVILDSSTENSGTSESGQLIWIPFVEAIVPDVNLDRREMQITPPKGLLQLNIRSDERSKKERRLLDWKERKKFQRRLIAAKKKLCELEQQHIFDGLRYGEKSQRSLLAEQIVSVNSSLLQQALRAIQVPINGSNMSGSMHDTMQWKSLSPLTISEQHLVSVGKEKLHAYSNHKETGLHLLSEGKVATVLVLNSGEPEKFSETDLGDTEHGEHSSMTVIETLLLDMQKFAEHRASVPVILISSAQNVQALENLFARHDYFGFNSEKVRFLEEEKLPVVSCSAVEQKKNKVLMKSPWVILQSPIGPGGIISALSSYNIVEYMIESGVEYVEVCSINRRCLCGNPMFLGFVDSHQPDIGILTFKDMAQLEDNFHIVLPMKSMNKLVNQIDKLQFDAIMKCNSHVELVNKEWIDVIPSETNSYEFRCSLDNLLNACSLQKACLMEVAD*

Click here to download the sequence:
Link to NCBI Protein BLAST