Transcript Information: S_Transcript_72927.p1


Annotated TAIR IDAT5G27270.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)EMB976
Annotation TypeOrtholog
Chromosome Positionchr5:9605650-9609625 | Forward length=1038
E-Value1.1E-275
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.5090538056097
Replicate 211.952810583944
Replicate 311.382291875262
Condition 2: 8 Hour
Replicate 115.437405519595
Replicate 216.68804950736
Replicate 316.122891691935
Condition 3: 24 Hour
Replicate 113.811440257974
Replicate 213.067186024878
Replicate 312.903621325587


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_72927.p1 GENE.S_Transcript_72927~~S_Transcript_72927.p1 ORF type:complete len:862 (+),score=159.47,PPR_2|PF13041.2|99,PPR_2|PF13041.2|9.8e-08,PPR_2|PF13041.2|4.5e-05,PPR_2|PF13041.2|2.1e-05,PPR_2|PF13041.2|4.1e-05,PPR_2|PF13041.2|0.016,PPR_2|PF13041.2|2.7,PPR_2|PF13041.2|1.3,PPR_2|PF13041.2|0.47,PPR_2|PF13041.2|32,PPR_2|PF13041.2|8.8e+02,PPR_2|PF13041.2|5.7e-06,PPR_2|PF13041.2|1.1e-12,PPR_2|PF13041.2|1.9e-06,PPR_2|PF13041.2|4.2e-09,PPR_2|PF13041.2|4.6e-11,PPR_2|PF13041.2|0.0054,PPR_2|PF13041.2|8.6e-05,PPR_2|PF13041.2|0.021,PPR_2|PF13041.2|5.7e+03,PPR|PF01535.16|1.2e+02,PPR|PF01535.16|2.5,PPR|PF01535.16|0.0011,PPR|PF01535.16|0.00041,PPR|PF01535.16|0.00026,PPR|PF01535.16|0.0043,PPR|PF01535.16|34,PPR|PF01535.16|3,PPR|PF01535.16|1.8,PPR|PF01535.16|0.00099,PPR|PF01535.16|2.6,PPR|PF01535.16|33,PPR|PF01535.16|3.4e-06,PPR|PF01535.16|1.8e+02,PPR|PF01535.16|0.0026,PPR|PF01535.16|1.7e-05,PPR|PF01535.16|1.9e-05,PPR|PF01535.16|1.5e-07,PPR|PF01535.16|0.054,PPR|PF01535.16|0.017,PPR|PF01535.16|0.029,PPR|PF01535.16|1.3e+03,PPR_1|PF12854.3|69,PPR_1|PF12854.3|1.1e+03,PPR_1|PF12854.3|0.076,PPR_1|PF12854.3|0.001,PPR_1|PF12854.3|0.65,PPR_1|PF12854.3|1.2,PPR_1|PF12854.3|1.7e+03,PPR_1|PF12854.3|8.5e+02,PPR_1|PF12854.3|3.3e+03,PPR_1|PF12854.3|0.62,PPR_1|PF12854.3|0.2,PPR_1|PF12854.3|7.8e-06,PPR_1|PF12854.3|0.18,PPR_1|PF12854.3|0.0013,PPR_1|PF12854.3|2.2e+02,PPR_1|PF12854.3|0.25,PPR_1|PF12854.3|0.011,PPR_3|PF13812.2|5.1e+03,PPR_3|PF13812.2|59,PPR_3|PF13812.2|0.093,PPR_3|PF13812.2|0.0042,PPR_3|PF13812.2|39,PPR_3|PF13812.2|6.8,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|7.5e+02,PPR_3|PF13812.2|3,PPR_3|PF13812.2|44,PPR_3|PF13812.2|0.0031,PPR_3|PF13812.2|0.1,PPR_3|PF13812.2|71,PPR_3|PF13812.2|0.014,PPR_3|PF13812.2|0.02,PPR_3|PF13812.2|13,PPR_3|PF13812.2|0.055,PPR_3|PF13812.2|57,PPR_3|PF13812.2|3.2e+03,TPR_12|PF13424.2|0.69,TPR_12|PF13424.2|0.003,TPR_12|PF13424.2|0.00071,TPR_12|PF13424.2|9.6e+03,TPR_12|PF13424.2|7.6e+03,TPR_12|PF13424.2|50,TPR_12|PF13424.2|0.21,TPR_12|PF13424.2|64,TPR_12|PF13424.2|0.28,TPR_14|PF13428.2|7.9e+02,TPR_14|PF13428.2|1.5e+03,TPR_14|PF13428.2|89,TPR_14|PF13428.2|3.3,TPR_14|PF13428.2|5.7e+02,TPR_14|PF13428.2|12,TPR_14|PF13428.2|17,TPR_14|PF13428.2|12,TPR_14|PF13428.2|83,TPR_16|PF13432.2|11,TPR_16|PF13432.2|0.25,TPR_16|PF13432.2|0.02,TPR_16|PF13432.2|1.2e+03,TPR_16|PF13432.2|84,TPR_16|PF13432.2|49,TPR_16|PF13432.2|0.98,TPR_16|PF13432.2|2.2,TPR_19|PF14559.2|8.1e+02,TPR_19|PF14559.2|0.0016,TPR_19|PF14559.2|3.4,TPR_19|PF14559.2|54,TPR_19|PF14559.2|1.2e+03,TPR_19|PF14559.2|2.6e+03,TPR_19|PF14559.2|1.5e+03,TPR_19|PF14559.2|1.7e+03,TPR_19|PF14559.2|1.6e+03,TPR_19|PF14559.2|5.1e+02,TPR_19|PF14559.2|27,TPR_19|PF14559.2|5.2e+02,TPR_11|PF13414.2|4.3,TPR_11|PF13414.2|0.16,TPR_11|PF13414.2|0.0064,TPR_11|PF13414.2|2.2e+02,TPR_11|PF13414.2|66,TPR_11|PF13414.2|5.9,TPR_11|PF13414.2|6.9e+02,TPR_11|PF13414.2|15,TPR_1|PF00515.24|8e+02,TPR_1|PF00515.24|8.4,TPR_1|PF00515.24|4.9,TPR_1|PF00515.24|6.3,TPR_1|PF00515.24|9.8e+03,TPR_1|PF00515.24|21,TPR_1|PF00515.24|7,TPR_1|PF00515.24|27,TPR_1|PF00515.24|66,TPR_1|PF00515.24|7.6e+03,TPR_1|PF00515.24|1.1e+04,TPR_7|PF13176.2|1.4e+02,TPR_7|PF13176.2|45,TPR_7|PF13176.2|69,TPR_7|PF13176.2|0.3,TPR_7|PF13176.2|2.5e+03,TPR_7|PF13176.2|6.7e+02,TPR_7|PF13176.2|1.2e+03,TPR_7|PF13176.2|1.1e+04,TPR_7|PF13176.2|1.6e+03,TPR_8|PF13181.2|9.3e+03,TPR_8|PF13181.2|1.6e+02,TPR_8|PF13181.2|3.7,TPR_8|PF13181.2|0.36,TPR_8|PF13181.2|1.3e+02,TPR_8|PF13181.2|4.8e+03,TPR_8|PF13181.2|15,TPR_8|PF13181.2|4.4e+03,TPR_8|PF13181.2|2.1e+02,TPR_8|PF13181.2|6.3e+03,TPR_8|PF13181.2|3e+02,TPR_8|PF13181.2|14,TPR_8|PF13181.2|8.6e+03,ANAPC3|PF12895.3|4.3e+03,ANAPC3|PF12895.3|0.14,ANAPC3|PF12895.3|7.7,ANAPC3|PF12895.3|3.6e+02,ANAPC3|PF12895.3|18,ANAPC3|PF12895.3|1.8e+03,RPN7|PF10602.5|8.1e+02,RPN7|PF10602.5|1.5,RPN7|PF10602.5|2.2,RPN7|PF10602.5|1.7e+03,RPN7|PF10602.5|3.3e+02,RPN7|PF10602.5|2.9e+03,RPN7|PF10602.5|53,RPN7|PF10602.5|1.1e+02,RPN7|PF10602.5|2.1e+02 S_Transcript_72927:1394-3979(+)
ATGCTTGATGCCGGATGTGAACCTGATGAAATTGCTTGTGGCACTATGCTCTGTACATATGCTCGATGGGGACGTCATAAAGCTATGTTATCATTCTATCCTGCTGTGCTGGAAAGGGGTGTTGTACTTTCTGTTTCAGTTTATAATTTCATGCTGTCATCCTTGCAAAAGAAGTCACTCCATCAAAATGTAGTACAGATATATCGAGACATGGTCATAAGGGGAGTGTTACCCAATCAATTTACCTTCACTGTAGCTATCTGCTCACTAATTAAAGAGGGTCTTGTTGAGGAGGGCTTGATGGCATTCAATAGGATGAAGAGCTTTGGCTTTGTGCCTGAGGAAGTTACTTACAGCCTTCTTATTACATCAAAGGTGAAAGAAGGTAAACAGGAGGAAGCATTGAGACTTTATGAAGAAATGCGATCACGTGACATACTTCCAAGTAATTTTACTTGTGCTTCACTTCTAACTCTCTATTACAAGAGTGGAGATTACTCGAAGGCCCTGTCTCTTTTTTCAGAGATGGAAAGGTACAAAATCCATGCTGATGAAGTCATTTACGGTTTACTGATACGTATATATGGCAAGCTTGGTCTTTATGATGATGCAGAAAAGACTTTTGCCGAGGCTGAGCGATTGGGTCAATTGAGTGATGAAAAGACGTATTTAGCAATCGCTCAAGTTCATCTTACCATGGGGGACTTTGCTAAAGCATTAAATTATATGGAGCTCATGAGGTCTCGAAATATATGGTTCTCTAGATTTGCCTATACTCTCTTATTGAAATGTTATGTGATGAAGGGGGATCTAGGATCTGCTGAACTAACATTTCAGTCTCTGTTCAAGACTGGACTTCCTGATTCAGGATCTTGTAATGACATGCTCAAAATGTACATCAGACAAGGATTGCTTGAGAAGGCTAAGGTTCTCATTGCTCAGATAAGAAAAGAGAGTATCGTATTTGATGAGGAGCTGTGCAGGACAGTGATGAAGGTATACTCAAAAGAGGGAATGCTTGAAGAAGTTGAGCAGTTGATGCAAGAGATAAGAGAAAAGGGATTGTTGGAATATAGCAGCTTCCTTCGAACTGTTGCTTTGATTTTGCATGCAGGTGGTGCAAATTGTGAAAGAGAAAAGGGCACATTGTTAGCCCCTGGATTGCCCGAAACTAATGCCCTGGAGCTTATGCTTGGTCTGTATTTGGCAACTGGCAATGGCATGATGATTGAACGCACCCTTGATTTTTTGCTTGACACTCCTGATGGCTTGTCTGCTGTAAATCAGCTGATTGGAAAATATGTCCGTGAAGGTGATTCATCCAAAGCTGAAATTCTGTATAATCTCTTAATAAAAGGAGATCCAAGACTTGATGATGGAATCTTGGCTTCTATGATTACTTTATATGGGAAACAACAGAAGCTGGAGAGAGTGAGAGAACTGTTTTCAGCTGCAGCCAATCCTGCTAAATATGGAACTGAAGTATACAATTCAATGATTGATGCCTGTGCTAAATGTGGCAAACCTGAGGAGGCTTACAATCTTTACATGCAGTGCACGGACAAAGGAAAGGATGTGAGCCCCGTGGCCATTAGTGTCCTTGTTAACACACTAACAATCCATGGGATGCATCAAGAGGCAGTGGATGTTATAAACAAAAGTTTCCATGGGAACATGATGCTTGACACCGTTGCATACAATACCTTTATCAAGGCGATGTTAGAAGCAGGAAAACTGCATTTTGCAACCAATATATATGATCGCATGCTTTCCAGGGGAGTTTCTCCATCAATTCAGACATATAGCACTATGATCAGTGTTTATGGAAGACAAAGGAAGTTAGACAAGGCAGTAGAGATGTTCAACATGGCACAGAATGCTGGCATACCTCTGGATGCGAAAGCATACACCAATCTAATAAGCATATATGGAAAATTTGGGAAGGCGCAGGAGGCATCTGATTTATTTGTGAAGATGCGGGAAGGGGGTGTAAAACCTGGAAAGATAAGCTACAATGTCATGATCAATGTGTACGGTGCTGCAGGACTTTATTATGAGGCAGAGGAACTTTTCCAGGCTATGCAAAAAGACGGTCTTCGTCCTGATTCCTTGACCTATCTTGCCCTTATGAGAGCATACACAACGAGTATGAAGTATCTAGAAGCAGAACAAGTCATAATCTCGATGCAGAAAGAAGGGATACATCCGTCCTGTGCTCATTTTGATCTCCTAATGTCAGTCTATGCTAATGCTGGCTTAATTGAGGAAGCTGAAAGGGTTTTCAAAACTATACTTGCATCTGGATTGAAGCCTGACCTAGTATGTTATAGGACCTTATTAAGGATTTACCTGGACCATGGACGTGTAGATGAAGGAATATCCTTTTTTGAAAGAATTGAAGAATCTGTGGAACCAGACAGGTTTATTATGAGCGCTGCTGTATGCCTGTACAGATCTACTGGACAGCATCTTAGAGCAGAAGCTATAATAAGCTCCATGAACGATTTGGGAATTTCATTTTTGAGAGGCCTTAACATTGGATCCAAGAAGAGAATTACCCAGACAAAATTAATGTATATGACCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_72927.p1 GENE.S_Transcript_72927~~S_Transcript_72927.p1 ORF type:complete len:862 (+),score=159.47,PPR_2|PF13041.2|99,PPR_2|PF13041.2|9.8e-08,PPR_2|PF13041.2|4.5e-05,PPR_2|PF13041.2|2.1e-05,PPR_2|PF13041.2|4.1e-05,PPR_2|PF13041.2|0.016,PPR_2|PF13041.2|2.7,PPR_2|PF13041.2|1.3,PPR_2|PF13041.2|0.47,PPR_2|PF13041.2|32,PPR_2|PF13041.2|8.8e+02,PPR_2|PF13041.2|5.7e-06,PPR_2|PF13041.2|1.1e-12,PPR_2|PF13041.2|1.9e-06,PPR_2|PF13041.2|4.2e-09,PPR_2|PF13041.2|4.6e-11,PPR_2|PF13041.2|0.0054,PPR_2|PF13041.2|8.6e-05,PPR_2|PF13041.2|0.021,PPR_2|PF13041.2|5.7e+03,PPR|PF01535.16|1.2e+02,PPR|PF01535.16|2.5,PPR|PF01535.16|0.0011,PPR|PF01535.16|0.00041,PPR|PF01535.16|0.00026,PPR|PF01535.16|0.0043,PPR|PF01535.16|34,PPR|PF01535.16|3,PPR|PF01535.16|1.8,PPR|PF01535.16|0.00099,PPR|PF01535.16|2.6,PPR|PF01535.16|33,PPR|PF01535.16|3.4e-06,PPR|PF01535.16|1.8e+02,PPR|PF01535.16|0.0026,PPR|PF01535.16|1.7e-05,PPR|PF01535.16|1.9e-05,PPR|PF01535.16|1.5e-07,PPR|PF01535.16|0.054,PPR|PF01535.16|0.017,PPR|PF01535.16|0.029,PPR|PF01535.16|1.3e+03,PPR_1|PF12854.3|69,PPR_1|PF12854.3|1.1e+03,PPR_1|PF12854.3|0.076,PPR_1|PF12854.3|0.001,PPR_1|PF12854.3|0.65,PPR_1|PF12854.3|1.2,PPR_1|PF12854.3|1.7e+03,PPR_1|PF12854.3|8.5e+02,PPR_1|PF12854.3|3.3e+03,PPR_1|PF12854.3|0.62,PPR_1|PF12854.3|0.2,PPR_1|PF12854.3|7.8e-06,PPR_1|PF12854.3|0.18,PPR_1|PF12854.3|0.0013,PPR_1|PF12854.3|2.2e+02,PPR_1|PF12854.3|0.25,PPR_1|PF12854.3|0.011,PPR_3|PF13812.2|5.1e+03,PPR_3|PF13812.2|59,PPR_3|PF13812.2|0.093,PPR_3|PF13812.2|0.0042,PPR_3|PF13812.2|39,PPR_3|PF13812.2|6.8,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|7.5e+02,PPR_3|PF13812.2|3,PPR_3|PF13812.2|44,PPR_3|PF13812.2|0.0031,PPR_3|PF13812.2|0.1,PPR_3|PF13812.2|71,PPR_3|PF13812.2|0.014,PPR_3|PF13812.2|0.02,PPR_3|PF13812.2|13,PPR_3|PF13812.2|0.055,PPR_3|PF13812.2|57,PPR_3|PF13812.2|3.2e+03,TPR_12|PF13424.2|0.69,TPR_12|PF13424.2|0.003,TPR_12|PF13424.2|0.00071,TPR_12|PF13424.2|9.6e+03,TPR_12|PF13424.2|7.6e+03,TPR_12|PF13424.2|50,TPR_12|PF13424.2|0.21,TPR_12|PF13424.2|64,TPR_12|PF13424.2|0.28,TPR_14|PF13428.2|7.9e+02,TPR_14|PF13428.2|1.5e+03,TPR_14|PF13428.2|89,TPR_14|PF13428.2|3.3,TPR_14|PF13428.2|5.7e+02,TPR_14|PF13428.2|12,TPR_14|PF13428.2|17,TPR_14|PF13428.2|12,TPR_14|PF13428.2|83,TPR_16|PF13432.2|11,TPR_16|PF13432.2|0.25,TPR_16|PF13432.2|0.02,TPR_16|PF13432.2|1.2e+03,TPR_16|PF13432.2|84,TPR_16|PF13432.2|49,TPR_16|PF13432.2|0.98,TPR_16|PF13432.2|2.2,TPR_19|PF14559.2|8.1e+02,TPR_19|PF14559.2|0.0016,TPR_19|PF14559.2|3.4,TPR_19|PF14559.2|54,TPR_19|PF14559.2|1.2e+03,TPR_19|PF14559.2|2.6e+03,TPR_19|PF14559.2|1.5e+03,TPR_19|PF14559.2|1.7e+03,TPR_19|PF14559.2|1.6e+03,TPR_19|PF14559.2|5.1e+02,TPR_19|PF14559.2|27,TPR_19|PF14559.2|5.2e+02,TPR_11|PF13414.2|4.3,TPR_11|PF13414.2|0.16,TPR_11|PF13414.2|0.0064,TPR_11|PF13414.2|2.2e+02,TPR_11|PF13414.2|66,TPR_11|PF13414.2|5.9,TPR_11|PF13414.2|6.9e+02,TPR_11|PF13414.2|15,TPR_1|PF00515.24|8e+02,TPR_1|PF00515.24|8.4,TPR_1|PF00515.24|4.9,TPR_1|PF00515.24|6.3,TPR_1|PF00515.24|9.8e+03,TPR_1|PF00515.24|21,TPR_1|PF00515.24|7,TPR_1|PF00515.24|27,TPR_1|PF00515.24|66,TPR_1|PF00515.24|7.6e+03,TPR_1|PF00515.24|1.1e+04,TPR_7|PF13176.2|1.4e+02,TPR_7|PF13176.2|45,TPR_7|PF13176.2|69,TPR_7|PF13176.2|0.3,TPR_7|PF13176.2|2.5e+03,TPR_7|PF13176.2|6.7e+02,TPR_7|PF13176.2|1.2e+03,TPR_7|PF13176.2|1.1e+04,TPR_7|PF13176.2|1.6e+03,TPR_8|PF13181.2|9.3e+03,TPR_8|PF13181.2|1.6e+02,TPR_8|PF13181.2|3.7,TPR_8|PF13181.2|0.36,TPR_8|PF13181.2|1.3e+02,TPR_8|PF13181.2|4.8e+03,TPR_8|PF13181.2|15,TPR_8|PF13181.2|4.4e+03,TPR_8|PF13181.2|2.1e+02,TPR_8|PF13181.2|6.3e+03,TPR_8|PF13181.2|3e+02,TPR_8|PF13181.2|14,TPR_8|PF13181.2|8.6e+03,ANAPC3|PF12895.3|4.3e+03,ANAPC3|PF12895.3|0.14,ANAPC3|PF12895.3|7.7,ANAPC3|PF12895.3|3.6e+02,ANAPC3|PF12895.3|18,ANAPC3|PF12895.3|1.8e+03,RPN7|PF10602.5|8.1e+02,RPN7|PF10602.5|1.5,RPN7|PF10602.5|2.2,RPN7|PF10602.5|1.7e+03,RPN7|PF10602.5|3.3e+02,RPN7|PF10602.5|2.9e+03,RPN7|PF10602.5|53,RPN7|PF10602.5|1.1e+02,RPN7|PF10602.5|2.1e+02 S_Transcript_72927:1394-3979(+)
MLDAGCEPDEIACGTMLCTYARWGRHKAMLSFYPAVLERGVVLSVSVYNFMLSSLQKKSLHQNVVQIYRDMVIRGVLPNQFTFTVAICSLIKEGLVEEGLMAFNRMKSFGFVPEEVTYSLLITSKVKEGKQEEALRLYEEMRSRDILPSNFTCASLLTLYYKSGDYSKALSLFSEMERYKIHADEVIYGLLIRIYGKLGLYDDAEKTFAEAERLGQLSDEKTYLAIAQVHLTMGDFAKALNYMELMRSRNIWFSRFAYTLLLKCYVMKGDLGSAELTFQSLFKTGLPDSGSCNDMLKMYIRQGLLEKAKVLIAQIRKESIVFDEELCRTVMKVYSKEGMLEEVEQLMQEIREKGLLEYSSFLRTVALILHAGGANCEREKGTLLAPGLPETNALELMLGLYLATGNGMMIERTLDFLLDTPDGLSAVNQLIGKYVREGDSSKAEILYNLLIKGDPRLDDGILASMITLYGKQQKLERVRELFSAAANPAKYGTEVYNSMIDACAKCGKPEEAYNLYMQCTDKGKDVSPVAISVLVNTLTIHGMHQEAVDVINKSFHGNMMLDTVAYNTFIKAMLEAGKLHFATNIYDRMLSRGVSPSIQTYSTMISVYGRQRKLDKAVEMFNMAQNAGIPLDAKAYTNLISIYGKFGKAQEASDLFVKMREGGVKPGKISYNVMINVYGAAGLYYEAEELFQAMQKDGLRPDSLTYLALMRAYTTSMKYLEAEQVIISMQKEGIHPSCAHFDLLMSVYANAGLIEEAERVFKTILASGLKPDLVCYRTLLRIYLDHGRVDEGISFFERIEESVEPDRFIMSAAVCLYRSTGQHLRAEAIISSMNDLGISFLRGLNIGSKKRITQTKLMYMT*

Click here to download the sequence:
Link to NCBI Protein BLAST