Transcript Information: S_Transcript_73017.p1


Annotated TAIR IDAT3G42670.1
Annotated Gene Namechromatin remodeling 38
Annotated Gene Symbol(s)CHR38, CLSY
Annotation TypeOrtholog
Chromosome Positionchr3:14755906-14760085 | Reverse length=1256
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.4420378633799
Replicate 28.4221726604286
Replicate 37.026461576761
Condition 2: 8 Hour
Replicate 119.553595163539
Replicate 218.888806336536
Replicate 319.672485102502
Condition 3: 24 Hour
Replicate 16.1643121826003
Replicate 27.1418148754807
Replicate 37.8535707129703


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_73017.p1 GENE.S_Transcript_73017~~S_Transcript_73017.p1 ORF type:complete len:1336 (+),score=262.77,SNF2_N|PF00176.19|1.8e-19,Helicase_C|PF00271.27|5e-14,ResIII|PF04851.11|2.5e+03,ResIII|PF04851.11|2.6e+03,ResIII|PF04851.11|4.3e-08,ResIII|PF04851.11|8.2e+03 S_Transcript_73017:812-4819(+)
ATGAGGAAAAGAGGTCTTCACCAAGCGTTGCATCCATTTGATGACCAGCCTTTTGAGGTTTTTTATCGTGGTTCATGGAAAATTGTGGAGCGTTTAAGAATCAGTGATGGAACTATAACTTTTAATTTTCCAGACCTTGGGTATCAATTTGAGCAAAAGCATTTCCTTCCCACCCTAAGGCTACAACCAAGAAGGGCGACTTTAACCGACTGTACCTGCGTACTAAGACCTGGTGCTGATGTTTCTGTGCTTTCAATATCCGAAAGTTCGGAAAATTCATCTGAAGAATCCTGCACTGGATGGTACGATGCTAGAATAACTTCGATTGAGAGAATTCCACATGGATCAGGATGCAACTGCAAGTTCTACATCAAATTCTTCTACATCAGCGATGATGCAGGCACAGATAGAAGAAAACTAAGCAAGGATGTTGAAGCCGTGGGGATTGATAAAATATCTGTCCTTCAAATTCTTCAGCAAAAGCCTTCCGAGAATACACATTATAGGTGGAACCTAGCCGAGGATTGCACTTCAGTCTCAAGGAATAAGTTGTTTCTTGGGAAGTTTGCTTCTGATATATCTTGGCTTCTCGTTGCATCTGTTCAAAAGCAGATTGTCTTTGATGTAAGATCAATAGACCAGAAGCTTGTCTACCAAATATTAGACGGGAGCTTTAACACATACTCTACGTCTGTTAATCTAAGTGCTGTAAATTTCAAGATTGATGGTGGGATTACTTCCTCTGTCATTTTTCCATTTGTTCCTGTTGACAATGTCAAACCAACTGCTCTCCAGGAAGTAAAAGAGGAAGTGGATCCAATCACCTGCTACGAGGTTATGGACTTGAGGCGATCAAAGCGCCGGAATGTGCAACCTGAGCGCTACTTGGGCGACATCGGTCTTGAGGAAACGGATACTACTGCACTCAGAATTGGGTACAAGAGATGGGATAAGGACGATGAACTTGCAATTGTGCTCGCAGATGGTGATGACATGAGTGCGGCCCTACTAGAAGAATCTGAAGAGAACTTTGAACGTGCTGTTGAAATATATTCTGGGGATACTTATCTTGTTTCGAAAGTTGGGGTTGAGGGGAAGAAAGAGAAAGCTGGAAAAGACGTACAATTAGACGAAGGAAGTGAGGGAAGAAATGGCCAAGGTGAAAAAGAGAGCAAGCGCAAATATGTCCAAAGAGAGAAAGAGAGTACGTTCAGAAATGTTCAAGGAGAGAAAGAGACTAAGGTCAGAAGTGCTCAAACTGAGAAGGAGAAAAAGGTAAGAAATTTCCAAAGAGAGAAAGAGAGCAAGGTTGGAAACAAAAGGGGAAAGGGGAGTGCGGCTGAACTTGCTATTATCCCAGTAACAGAGGAAGGGAATGTGATGCCAAGGGAACAAAGTCATCTCCTTGCGGAGATACGTCCGAATCCTCTCAATATAGATGATGATAACGTGCCCTTAAAGTACTACCGCAGGAGATTTAGAACACCAAGAACAACACGCACAAAGAAGATCTCAGAATTGGATGATTTTGGTGAAGAACATAGATGGGGGGGAAGGGGTTCAAACAACAGATCACAAACAAAGAATTACCATCATATGTCTTCTTCTAGGAGTAACAAGTATTCTGAGGATCCTTCCTCGAGAAGTAAAACGAAAACCTTGGATATTGGTGTTTACAAGGATCTAATATCAACTTACATGAAGAACATACAATTGACAATAGAAAATAAGCAGCCGCTTCCTGCTGATGCATGGAAAAATCTTCAAGGAGCATCATCTATGTATGAAAAGAAGGCTGCCGAGGAAGCTTCACAGCCAGAGGAAGAGGAAGAAGAGTCCGAGACTGAAATGTTGTTTAGAGAAATGGAACTCTGTTTGGCGGCAGCATATTATCTTGAAGAGGAGAATTCAAAGGCTGAAGGCGATCCAATTCAGAACTTCTTCAAAGATTCTTGTCAGCACATCTACATCGTAGATGATGAGATCGGGATTCTGTGCAAATTGTGTGGATATGTAGCAACTGAAATCAGAGATGTCGCACCCCCATTTGTGCAAACAACAGGAGGACCTATAAAACATGACCGAGGTGAAAAAATTGAGAAGGATGATACAGAGCATAAGTTGCTTAGTGAGGCATGCGCTGATCTTGTCTACAACCCTTCTTCTACTGATGTTCCCTGGGCCGAATCAAATGACAATGTTTGGGGCCTAATTCCGAGTATCAGAAAAAAATTACACGACCATCAAAAGAAAGCTTTTGAGTTCCTGTGGAGAAATCTTGCAGGGTCCTTGATACCTTCAGAAATGGAACCATCAAGCAAGAAAGTGGGTGGTTGTGTAATATCTCATTCTCCTGGTGCTGGAAAAACCTTTCTTATCATTGCATTCTTGGTAAGTTACTTGAAGCTATTCCCAGGAAAGCGGCCTTTGGTTCTTGCACCAAAGACAACACTTTATACATGGTACAAGGAAATTATCAAGTGGGAATTCCCTGTCCCCGTTTATCAAATCCATGGACGTAGAACCTACAGAGATAGAATCTACATGCAGAAAATTGGGACCGCCTCATCAACTGTGGTACCAAATGGAGATATCATGCATGTCCTTGACTGCTTGGAGAAAATACAGAAGTGGCATGCGCACCCAAGTGTTCTTCTCATGGGTTACACCTCATTTCTATCACTGATGCGAGAAGATTCAAAATATGCCCATCGTAGGTACATGGGTCAGATTTTGCGGGAAAGTCCAGGGATTCTCATACTAGATGAAGGGCACAACCCAAGAAGCACGAAGTCAAGGCTGAGGAAAGCTTTGATGAGAGTTGAGACAGAATTCAGGATTTTGCTGTCAGGTACTTTGTTTCAGAACAACTTCGGTGAATATTTCAATACCCTTTGCTTAGCAAGGCCAAAGTTTGTCAATGAGGTCTTGCGGGTGCTAGATCCAAAGTACAAAAAGAAAATAAAGGGGCAGAAGAAAACAAGGACTTCCATAGAAAACAGGGCAAGAAAGGTTTTCATGGACATAATCGCAAGGAAAATCAACTCTAACATCCCAGACGAGAGAGTCGATGGTCTCAACATGTTGAAGAACATGACAAACAAATTCATTGATGTATACGAAGGTGGCGGCGCCGAGAATCTCCCTGGCCTGCAGAGTTATACCCTAATGATGAAACCTACGTCCTTGCAGCACGAAATCCTTGTCAGACTACATCAACACATGAATGTCGCTAGAGGATTCCCCTTGGAACTCGAGCTCATGATTACCCTTGGATCTATCCATCCCTGGCTGATTAAAACAGCAGTTTGTGCTAACAAGTTTCTAAGCTTAGAGGAGCTCCATAGCCTTGATGAGTTCAAGCTCGACCCCACAAAAGGGTCGAAGGTGAAATTCGTGCTTGGCTTAGTTCAGCGATCTATAATAAGAAGAGAGAAGGTATTGATCTTTTGTCATAACATAGCACCCATCAATCTCTTTCTCGAGCTTTTCGAGAGGATATATGGGTGGAGGAAGGGCCATGATGTTCTGGTCCTTCAGGGGGATCTGGAACTCTTTGAAAGGGGAAGGGTGATGGATAAATTCGAGGAACGTGGAGGGCCATCAAAGGTTTTACTGGCTTCAATCAATGCTTGTGCTGAAGGTATCACTTTGACTGCAGCTTCAAGGGTGGTTTTGCTGGATTCCGAGTGGAACCCATCAAAGCAAAAACAGGCCATTGCTCGAGCTTTCCGTCCTGGTCAAGAGAAGGTAGTCTATGTGTATCAGCTCTTGGCAACTGGCACATTGGAGGAAGACAAGTATGGTAGGACGACGTGGAAAGAATGGGTCTCCTGCATGATATTCAGTGAGGAGCTCGTAGATGACCCTTCAAAATGGCAAGCAAATAAGATTGAAGATGCTTTGCTGAGGGAGATTATAGAGGAGGACCATGCTAAATCTTTCCATATGATTATGAAGAACGAGAAGGCTTCATATGAAAACCCTTTGAAGGTGATCAATGAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_73017.p1 GENE.S_Transcript_73017~~S_Transcript_73017.p1 ORF type:complete len:1336 (+),score=262.77,SNF2_N|PF00176.19|1.8e-19,Helicase_C|PF00271.27|5e-14,ResIII|PF04851.11|2.5e+03,ResIII|PF04851.11|2.6e+03,ResIII|PF04851.11|4.3e-08,ResIII|PF04851.11|8.2e+03 S_Transcript_73017:812-4819(+)
MRKRGLHQALHPFDDQPFEVFYRGSWKIVERLRISDGTITFNFPDLGYQFEQKHFLPTLRLQPRRATLTDCTCVLRPGADVSVLSISESSENSSEESCTGWYDARITSIERIPHGSGCNCKFYIKFFYISDDAGTDRRKLSKDVEAVGIDKISVLQILQQKPSENTHYRWNLAEDCTSVSRNKLFLGKFASDISWLLVASVQKQIVFDVRSIDQKLVYQILDGSFNTYSTSVNLSAVNFKIDGGITSSVIFPFVPVDNVKPTALQEVKEEVDPITCYEVMDLRRSKRRNVQPERYLGDIGLEETDTTALRIGYKRWDKDDELAIVLADGDDMSAALLEESEENFERAVEIYSGDTYLVSKVGVEGKKEKAGKDVQLDEGSEGRNGQGEKESKRKYVQREKESTFRNVQGEKETKVRSAQTEKEKKVRNFQREKESKVGNKRGKGSAAELAIIPVTEEGNVMPREQSHLLAEIRPNPLNIDDDNVPLKYYRRRFRTPRTTRTKKISELDDFGEEHRWGGRGSNNRSQTKNYHHMSSSRSNKYSEDPSSRSKTKTLDIGVYKDLISTYMKNIQLTIENKQPLPADAWKNLQGASSMYEKKAAEEASQPEEEEEESETEMLFREMELCLAAAYYLEEENSKAEGDPIQNFFKDSCQHIYIVDDEIGILCKLCGYVATEIRDVAPPFVQTTGGPIKHDRGEKIEKDDTEHKLLSEACADLVYNPSSTDVPWAESNDNVWGLIPSIRKKLHDHQKKAFEFLWRNLAGSLIPSEMEPSSKKVGGCVISHSPGAGKTFLIIAFLVSYLKLFPGKRPLVLAPKTTLYTWYKEIIKWEFPVPVYQIHGRRTYRDRIYMQKIGTASSTVVPNGDIMHVLDCLEKIQKWHAHPSVLLMGYTSFLSLMREDSKYAHRRYMGQILRESPGILILDEGHNPRSTKSRLRKALMRVETEFRILLSGTLFQNNFGEYFNTLCLARPKFVNEVLRVLDPKYKKKIKGQKKTRTSIENRARKVFMDIIARKINSNIPDERVDGLNMLKNMTNKFIDVYEGGGAENLPGLQSYTLMMKPTSLQHEILVRLHQHMNVARGFPLELELMITLGSIHPWLIKTAVCANKFLSLEELHSLDEFKLDPTKGSKVKFVLGLVQRSIIRREKVLIFCHNIAPINLFLELFERIYGWRKGHDVLVLQGDLELFERGRVMDKFEERGGPSKVLLASINACAEGITLTAASRVVLLDSEWNPSKQKQAIARAFRPGQEKVVYVYQLLATGTLEEDKYGRTTWKEWVSCMIFSEELVDDPSKWQANKIEDALLREIIEEDHAKSFHMIMKNEKASYENPLKVINE*

Click here to download the sequence:
Link to NCBI Protein BLAST