Transcript Information: S_Transcript_73266.p2


Annotated TAIR IDAT5G09280.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2880423-2881597 | Reverse length=297
E-Value1.5E-133
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6897143641384
Replicate 21.9261165486719
Replicate 31.1709673703873
Condition 2: 8 Hour
Replicate 11.0154947770063
Replicate 21.8347283275966
Replicate 31.2969960182925
Condition 3: 24 Hour
Replicate 13.640813915099
Replicate 23.8372591028736
Replicate 31.2677747187757


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_73266.p2 GENE.S_Transcript_73266~~S_Transcript_73266.p2 ORF type:complete len:378 (+),score=62.24,Pec_lyase_C|PF00544.15|2.7e-28 S_Transcript_73266:3215-4348(+)
ATGACTACTCAGATTCTCTCAGCACTCTTTCTTTCCATTCTGCTAGCCATAGCGCCAAACAGCAGTTTGGCTAAGAAAACTGGCCTTGCAAAATGGAATGCCATTGATGTCTGCTGGCGTGGGAACACTAACTGGGCATCGCAAAGGCAAGAGCTAGCGCGATGCTCAGCAGGTTACGTAGGGAAGATGACTAACAATGTCGGAAAGGATGTAACGAAATATGTCGTCACAGATCCTAGTGATGATGCCGTGAATCCTAAGCCTGGGACTCTTCGTTATGGAGTCACCAAGATTCCTGGAAAGGTATGGATCACATTCCAAAAGGACATGAACATCAAGCTCGCGAGGCCCCTTGTTGTTGGAAGCTTTACAACCATTGATGGCCGAGGTGCTAGTGTTCACATCTCTAAGGGTGGTTGCCTCTTGCTCCATAAGGTTACTGATGTTATCATCCATGGCTTGCGAATCCACCATTGTCGTGCTCAACCAGCAGGCAAAGTGATGGGACCTGGTTCCAAGCTGATTGAACTCAGCGAGATGGATGGTGATGCCATTAGGATGATTGCATCCAAAAAGGTTTGGATAGACCACAACACCTTATATAAATCCGAGGATGGCCTCATAGATGTAACCCTTGGTTCAACCAACATCACCATCTCAAATAACTGGTTCAGGGACCATGACAAGGTCATGCTCCTCGGCCATGATGATGCATTCAAAGCTGATAGGGACATGAAGGTCACAGTTGTATACAACCGTTTTGGCCCTAACTGCAACCAGCGTATGCCAAGGGTCCGTCATGGGTATGCTCATGTTGTTAACAATCTCTACCTAGGATGGAAAGTATATGCAATTGGAGGGAGCATGAACCCTAGCATAAAGAGCGAGTCTAACCTGTTTGTAGCCCCAGCTGGAAACAAAGAGATATTAAGAAAGATGAGTGGGAAAAACTGGAATGTTAAGTCTGTCGGTGATGCTTTGGAAAATGGAGCAAGCTTCAACGAAACAGGAACCGGTTATGTGAAACCAAACTACAACAGTGAACAGATTTTCCCAGTTGAAAATGCTAGGACTGTCAGGGCACTCACCAGATCAGCTGGAGCTCTCCGCTGCCAAGAAGGATCATTATGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_73266.p2 GENE.S_Transcript_73266~~S_Transcript_73266.p2 ORF type:complete len:378 (+),score=62.24,Pec_lyase_C|PF00544.15|2.7e-28 S_Transcript_73266:3215-4348(+)
MTTQILSALFLSILLAIAPNSSLAKKTGLAKWNAIDVCWRGNTNWASQRQELARCSAGYVGKMTNNVGKDVTKYVVTDPSDDAVNPKPGTLRYGVTKIPGKVWITFQKDMNIKLARPLVVGSFTTIDGRGASVHISKGGCLLLHKVTDVIIHGLRIHHCRAQPAGKVMGPGSKLIELSEMDGDAIRMIASKKVWIDHNTLYKSEDGLIDVTLGSTNITISNNWFRDHDKVMLLGHDDAFKADRDMKVTVVYNRFGPNCNQRMPRVRHGYAHVVNNLYLGWKVYAIGGSMNPSIKSESNLFVAPAGNKEILRKMSGKNWNVKSVGDALENGASFNETGTGYVKPNYNSEQIFPVENARTVRALTRSAGALRCQEGSLC*

Click here to download the sequence:
Link to NCBI Protein BLAST